RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PSCAO43653 123 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
COL4A3-204ENST00000469504 GCGP01275 180 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 ATP6V0CP27449 155 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
COL4A3-204ENST00000469504 LAGE3Q14657 143 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 LELP1Q5T871 98 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 SLC25A29Q8N8R3 303 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 INO80EQ8NBZ0 244 aaPredicted RBP7.4□□□□□ -1.22
COL4A3-204ENST00000469504 MED28Q9H204 178 aa7.4□□□□□ -1.22
COL4A3-204ENST00000469504 A8MWV9 139 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 IGLV2-11P01706 119 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 GCSHP23434 173 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 OR10J3Q5JRS4 329 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 FRZBQ92765 325 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 GTSF1LQ9H1H1 148 aa7.39□□□□□ -1.23
COL4A3-204ENST00000469504 BORCS7-ASMTA0A0B4J1R7 106 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 LOC100131303A0A0U1RQF7 123 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 GGTLC3B5MD39 225 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 GIPP09681 153 aaPredicted RBP7.38□□□□□ -1.23
COL4A3-204ENST00000469504 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
COL4A3-204ENST00000469504 XGP55808 180 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 ZNF506Q5JVG8 444 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 PRNTQ86SH4 94 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 HIST1H2BAQ96A08 127 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 TM2D2Q9BX73 214 aa7.38□□□□□ -1.23
COL4A3-204ENST00000469504 CTXND1A0A1B0GTU2 59 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
COL4A3-204ENST00000469504 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
COL4A3-204ENST00000469504 FGF8P55075 233 aaPredicted RBP7.37□□□□□ -1.23
COL4A3-204ENST00000469504 SGK494Q96LW2 274 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 C11orf21Q9P2W6 132 aa7.37□□□□□ -1.23
COL4A3-204ENST00000469504 A0A087WWC5 75 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 PGPEP1LA6NFU8 196 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 RHODO00212 210 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 C1QBP02746 253 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 ASIPP42127 132 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 TOR2AQ5JU69 321 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 DPPA3Q6W0C5 159 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 Q8N814 137 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 IL36BQ9NZH7 164 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 ZFP30Q9Y2G7 519 aa7.36□□□□□ -1.23
COL4A3-204ENST00000469504 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 IFNA7P01567 189 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 SEC11BP0C7V7 166 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 DNLZQ5SXM8 178 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 COX8CQ7Z4L0 72 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 PARLQ9H300 379 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 COX11Q9Y6N1 276 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 ARL2-SNX15V9GYD0 113 aa7.35□□□□□ -1.23
COL4A3-204ENST00000469504 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 RNF222A6NCQ9 220 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 PEX7O00628 323 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 LGALSLQ3ZCW2 172 aaPredicted RBP7.34□□□□□ -1.23
COL4A3-204ENST00000469504 AKR1C8PQ5T2L2 129 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 Q5VSD8 79 aa7.34□□□□□ -1.23
COL4A3-204ENST00000469504 RPL7L1Q6DKI1 246 aaKnown RBP7.34□□□□□ -1.23
COL4A3-204ENST00000469504 FXYD6-FXYD2A0A087WZ82 144 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 TRBV6-1A0A0K0K1D8 114 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 FAM74A7A6NL05 159 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 B4DEV8 164 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 FHITP49789 147 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 Q86TA4 180 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 LINC00479Q96M42 142 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 Q9HAA7 133 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 FAT1Q14517 4588 aa7.33□□□□□ -1.24
COL4A3-204ENST00000469504 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 IGHV3-30-3P0DP02 117 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL4A3-204ENST00000469504 UBE2G1P62253 170 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 ZNF726P1Q15940 193 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 FAM162BQ5T6X4 162 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 OR11H4Q8NGC9 324 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 OR2T35Q8NGX2 323 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 STOML3Q8TAV4 291 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 RMI2Q96E14 147 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 CHCHD7Q9BUK0 85 aa7.32□□□□□ -1.24
COL4A3-204ENST00000469504 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
COL4A3-204ENST00000469504 TRAV34A0A0B4J273 112 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 KRBOX1C9JBD0 128 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 GAGE1Q13065 139 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms