RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TP53TG3Q9ULZ0 132 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 U3KQK5 164 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 X6R8D5 127 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 IGHV3-16A0A0C4DH30 117 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 M0R381 172 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 DEFB4AO15263 64 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 ARMS2P0C7Q2 107 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 MED14OSP0DP75 135 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 GZMBP10144 247 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
HDAC6-216ENST00000468949 C10orf91Q5T1B1 145 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 SMIM15Q7Z3B0 74 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 ZFP82Q8N141 532 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 Q8NAQ8 132 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 TSKUQ8WUA8 353 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 GFRA4Q9GZZ7 299 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 C11orf68Q9H3H3 251 aaKnown RBP5.86□□□□□ -1.47
HDAC6-216ENST00000468949 NOP10Q9NPE3 64 aaKnown RBP5.86□□□□□ -1.47
HDAC6-216ENST00000468949 IL36BQ9NZH7 164 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 MDFICQ9P1T7 246 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 V9GYV3 84 aa5.86□□□□□ -1.47
HDAC6-216ENST00000468949 TRGV2A0A075B6R0 118 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 A0A0J9YWU9 116 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 CXorf65A6NEN9 183 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 LYRM9A8MSI8 78 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 HIGD1CA8MV81 97 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 F2Z2F3 143 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 M0R2P5 195 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 PRM2P04554 102 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 SPART-AS1P0CW21 52 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 AZU1P20160 251 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 S100A1P23297 94 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 SSTP61278 116 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 DAD1P61803 113 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 CACNG7P62955 275 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 LINC00469Q8N7U9 141 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 WWC2-AS2Q96NR7 200 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 NAT8BQ9UHF3 227 aa5.85□□□□□ -1.47
HDAC6-216ENST00000468949 A0A087WWC5 75 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 GAGE12BA1L429 117 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 C7orf77A4D0Y5 90 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 FAM231BA6NCW3 169 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 GAGE7O76087 117 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 OR5AL1P0C617 328 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 GAGE12FP0CL80 117 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 GAGE12GP0CL81 117 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 GAGE12IP0CL82 117 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 SMIM17P0DL12 118 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 DEFB130BP0DP73 79 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 DEFB130AP0DP74 79 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
HDAC6-216ENST00000468949 ZNF876PQ49A33 203 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 DNLZQ5SXM8 178 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 FAM222AQ5U5X8 452 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 PGLYRP4Q96LB8 373 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 C9orf85Q96MD7 179 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 AP1S3Q96PC3 154 aa5.84□□□□□ -1.47
HDAC6-216ENST00000468949 MRPL16Q9NX20 251 aaKnown RBP5.84□□□□□ -1.47
HDAC6-216ENST00000468949 COL7A1Q02388 2944 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 MUC21A0A0G2JKD1 596 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 MUC21A0A140T8X8 626 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 A0A1B0GUT8 65 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 SNAI2O43623 268 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 S100A8P05109 93 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 TRGC1P0CF51 173 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 RNASE3P12724 160 aaKnown RBP5.83□□□□□ -1.48
HDAC6-216ENST00000468949 CTRLP40313 264 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 RIGQ13278 110 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 TWIST1Q15672 202 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 LGALS9BQ3B8N2 356 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 LYZL1Q6UWQ5 148 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 OR10AG1Q8NH19 301 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 C11orf45Q8TAV5 145 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 BTF3L4Q96K17 158 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 NDUFAF3Q9BU61 184 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 URGCP-MRPS24S4R325 110 aa5.83□□□□□ -1.48
HDAC6-216ENST00000468949 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 A8MWV9 139 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 SPINK4O60575 86 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 IGLC6P0CF74 106 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 Q6ZTI0 123 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 OR4C5Q8NGB2 326 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 GTSF1Q8WW33 167 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 IMMP2LQ96T52 175 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 TMEM242Q9NWH2 141 aa5.82□□□□□ -1.48
HDAC6-216ENST00000468949 HUWE1Q7Z6Z7 4374 aaKnown RBP5.82□□□□□ -1.48
HDAC6-216ENST00000468949 A0A1B0GW15 77 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 PLAC8L1A1L4L8 177 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 RHODO00212 210 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 MGPP08493 103 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 HTN3P15516 51 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 FAM3BP58499 235 aaPredicted RBP5.81□□□□□ -1.48
HDAC6-216ENST00000468949 RAB4BP61018 213 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 HBBP68871 147 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms