RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 LINC01556Q5JQF7 62 aa14.2□□□□□ -0.14
SHANK1-206ENST00000468654 SAPCD1Q5SSQ6 148 aa14.2□□□□□ -0.14
SHANK1-206ENST00000468654 BORCS7-ASMTA0A0B4J1R7 106 aa14.19□□□□□ -0.14
SHANK1-206ENST00000468654 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
SHANK1-206ENST00000468654 CTXND1A0A1B0GTU2 59 aa14.19□□□□□ -0.14
SHANK1-206ENST00000468654 PGPEP1LA6NFU8 196 aa14.19□□□□□ -0.14
SHANK1-206ENST00000468654 LINC00479Q96M42 142 aa14.18□□□□□ -0.14
SHANK1-206ENST00000468654 ARL2-SNX15V9GYD0 113 aa14.18□□□□□ -0.14
SHANK1-206ENST00000468654 TRAV34A0A0B4J273 112 aa14.17□□□□□ -0.14
SHANK1-206ENST00000468654 MGST1P10620 155 aaKnown RBP14.17□□□□□ -0.14
SHANK1-206ENST00000468654 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
SHANK1-206ENST00000468654 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 IGKV3D-20A0A0C4DH25 116 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 EPM2AB3EWF7 344 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 PEX7O00628 323 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 Q86TA4 180 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 OR2T35Q8NGX2 323 aa14.16□□□□□ -0.14
SHANK1-206ENST00000468654 IBA57-AS1B1ANH7 110 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 G3V3Q6 166 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 IFNA7P01567 189 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 XGP55808 180 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 KRTAP10-1P60331 282 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 UBE2G2P60604 165 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 OR10J3Q5JRS4 329 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 PIK3CD-AS1Q5SR53 167 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 LELP1Q5T871 98 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 PARLQ9H300 379 aa14.15□□□□□ -0.14
SHANK1-206ENST00000468654 MYCBP2O75592 4640 aa14.14□□□□□ -0.15
SHANK1-206ENST00000468654 FAM74A7A6NL05 159 aa14.14□□□□□ -0.15
SHANK1-206ENST00000468654 AKR1C8PQ5T2L2 129 aa14.14□□□□□ -0.15
SHANK1-206ENST00000468654 ZFP2Q6ZN57 461 aa14.14□□□□□ -0.15
SHANK1-206ENST00000468654 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
SHANK1-206ENST00000468654 FABP5P3A8MUU1 101 aa14.13□□□□□ -0.15
SHANK1-206ENST00000468654 A8MWV9 139 aa14.13□□□□□ -0.15
SHANK1-206ENST00000468654 S100A4P26447 101 aaKnown RBP14.13□□□□□ -0.15
SHANK1-206ENST00000468654 ASIPP42127 132 aa14.13□□□□□ -0.15
SHANK1-206ENST00000468654 FGF8P55075 233 aaPredicted RBP14.13□□□□□ -0.15
SHANK1-206ENST00000468654 ATP6V0E2Q8NHE4 81 aa14.13□□□□□ -0.15
SHANK1-206ENST00000468654 HIST1H2BAQ96A08 127 aa14.13□□□□□ -0.15
SHANK1-206ENST00000468654 NKX6-2Q9C056 277 aaPredicted RBP14.13□□□□□ -0.15
SHANK1-206ENST00000468654 FLG2Q5D862 2391 aaPredicted RBP14.13□□□□□ -0.15
SHANK1-206ENST00000468654 LRCOL1A6NCL2 159 aa14.12□□□□□ -0.15
SHANK1-206ENST00000468654 LINC00694P0DN24 101 aa14.12□□□□□ -0.15
SHANK1-206ENST00000468654 Q6ZSN1 163 aa14.12□□□□□ -0.15
SHANK1-206ENST00000468654 PSCAO43653 123 aa14.11□□□□□ -0.15
SHANK1-206ENST00000468654 COX8CQ7Z4L0 72 aa14.11□□□□□ -0.15
SHANK1-206ENST00000468654 IL36BQ9NZH7 164 aa14.11□□□□□ -0.15
SHANK1-206ENST00000468654 MAP1LC3B2A6NCE7 125 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 B4DEV8 164 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 GCSHP23434 173 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 LGALSLQ3ZCW2 172 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-206ENST00000468654 Q5VSD8 79 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 UFSP1Q6NVU6 142 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 ZC2HC1AQ96GY0 325 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 MAP1LC3BQ9GZQ8 125 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 Q9HAA7 133 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 CYTL1Q9NRR1 136 aa14.1□□□□□ -0.15
SHANK1-206ENST00000468654 H3BVH4 76 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 IGHV3-30P01768 117 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 IGHV3-30-3P0DP02 117 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 IGHV3-30-5P0DP03 117 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 CRIP1P50238 77 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 LAGE3Q14657 143 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 DNLZQ5SXM8 178 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 NTN5Q8WTR8 489 aaPredicted RBP14.09□□□□□ -0.15
SHANK1-206ENST00000468654 JPT2Q9H910 190 aa14.09□□□□□ -0.15
SHANK1-206ENST00000468654 SRRM2Q9UQ35 2752 aaKnown RBP14.08□□□□□ -0.16
SHANK1-206ENST00000468654 GAGE12JA6NER3 117 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 KRBOX1C9JBD0 128 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 ARPC5O15511 151 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 SH2D1AO60880 128 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 GAGE1Q13065 139 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 GAGE4Q13068 117 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 GAGE5Q13069 117 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 GAGE13Q4V321 117 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 FMC1Q96HJ9 113 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 ZFP30Q9Y2G7 519 aa14.08□□□□□ -0.16
SHANK1-206ENST00000468654 IGLV5-52A0A0A0MRZ9 124 aa14.07□□□□□ -0.16
SHANK1-206ENST00000468654 TCEAL7Q9BRU2 100 aa14.07□□□□□ -0.16
SHANK1-206ENST00000468654 SAMD10Q9BYL1 202 aa14.07□□□□□ -0.16
SHANK1-206ENST00000468654 M0R036 132 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 FHITP49789 147 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 UBE2G1P62253 170 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 RGS21Q2M5E4 152 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 FAM162BQ5T6X4 162 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 DMRTA1Q5VZB9 504 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 Q8N3U1 123 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 Q8N814 137 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
SHANK1-206ENST00000468654 TRBV6-1A0A0K0K1D8 114 aa14.05□□□□□ -0.16
SHANK1-206ENST00000468654 RHODO00212 210 aa14.05□□□□□ -0.16
SHANK1-206ENST00000468654 ARMS2P0C7Q2 107 aa14.05□□□□□ -0.16
SHANK1-206ENST00000468654 INAFM2P0DMQ5 153 aa14.05□□□□□ -0.16
SHANK1-206ENST00000468654 C14orf178Q8N769 122 aaPredicted RBP14.05□□□□□ -0.16
SHANK1-206ENST00000468654 Q9UF83 564 aa14.05□□□□□ -0.16
SHANK1-206ENST00000468654 LTAP01374 205 aa14.04□□□□□ -0.16
SHANK1-206ENST00000468654 OR11H4Q8NGC9 324 aa14.04□□□□□ -0.16
SHANK1-206ENST00000468654 DNAH8Q96JB1 4490 aa14.04□□□□□ -0.16
SHANK1-206ENST00000468654 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms