RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 CT83Q5H943 113 aa12.15□□□□□ -0.46
VARS2-204ENST00000467717 RASL10AQ92737 203 aa12.15□□□□□ -0.46
VARS2-204ENST00000467717 SCRT2Q9NQ03 307 aa12.15□□□□□ -0.46
VARS2-204ENST00000467717 GAGE12BA1L429 117 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 GAGE7O76087 117 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 GZMBP10144 247 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 OR10G8Q8NGN5 311 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 PTH2Q96A98 100 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 SSBP4Q9BWG4 385 aaPredicted RBP12.14□□□□□ -0.47
VARS2-204ENST00000467717 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
VARS2-204ENST00000467717 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
VARS2-204ENST00000467717 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
VARS2-204ENST00000467717 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
VARS2-204ENST00000467717 NDUFA5Q16718 116 aa12.13□□□□□ -0.47
VARS2-204ENST00000467717 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
VARS2-204ENST00000467717 Q6ZTC4 211 aa12.13□□□□□ -0.47
VARS2-204ENST00000467717 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
VARS2-204ENST00000467717 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 A8MWL6 223 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 SNAI2O43623 268 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 OR5AL1P0C617 328 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 C10orf91Q5T1B1 145 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 TPPP3Q9BW30 176 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 V9GYV3 84 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
VARS2-204ENST00000467717 STARD9Q9P2P6 4700 aa12.11□□□□□ -0.47
VARS2-204ENST00000467717 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
VARS2-204ENST00000467717 CARHSP1Q9Y2V2 147 aaKnown RBP12.11□□□□□ -0.47
VARS2-204ENST00000467717 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
VARS2-204ENST00000467717 F2Z2F3 143 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 TSKUQ8WUA8 353 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 GTSF1Q8WW33 167 aa12.1□□□□□ -0.47
VARS2-204ENST00000467717 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 M0R381 172 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 MT-ND4LP03901 98 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 ATP5G1P05496 136 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 MUC7Q8TAX7 377 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 GFRA4Q9GZZ7 299 aa12.09□□□□□ -0.47
VARS2-204ENST00000467717 TRAV10A0A0B4J240 114 aa12.08□□□□□ -0.48
VARS2-204ENST00000467717 CTRLP40313 264 aa12.08□□□□□ -0.48
VARS2-204ENST00000467717 FOXA3P55318 350 aaPredicted RBP12.08□□□□□ -0.48
VARS2-204ENST00000467717 RNF212Q495C1 297 aa12.08□□□□□ -0.48
VARS2-204ENST00000467717 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
VARS2-204ENST00000467717 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
VARS2-204ENST00000467717 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 A8MWV9 139 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 NXPH4O95158 308 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 CACNG7P62955 275 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 ANAPC16Q96DE5 110 aa12.07□□□□□ -0.48
VARS2-204ENST00000467717 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 HIGD1CA8MV81 97 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 RS1O15537 224 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 HTN3P15516 51 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 WDR73Q6P4I2 378 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 POM121L12Q8N7R1 296 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 CNFNQ9BYD5 112 aa12.06□□□□□ -0.48
VARS2-204ENST00000467717 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 F5H768 121 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 APOC3P02656 99 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 SSTP61278 116 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
VARS2-204ENST00000467717 EPPK1P58107 5090 aaKnown RBP12.05□□□□□ -0.48
VARS2-204ENST00000467717 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
VARS2-204ENST00000467717 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
VARS2-204ENST00000467717 CIDEAO60543 219 aa12.04□□□□□ -0.48
VARS2-204ENST00000467717 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
VARS2-204ENST00000467717 CSMD3Q7Z407 3707 aa12.04□□□□□ -0.48
VARS2-204ENST00000467717 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 HOXA5P20719 270 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 SVBPQ8N300 66 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 CLRN3Q8NCR9 226 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 CTDSP1Q9GZU7 261 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 JPT2Q9H910 190 aa12.03□□□□□ -0.48
VARS2-204ENST00000467717 MUC4Q99102 2169 aa12.02□□□□□ -0.48
VARS2-204ENST00000467717 NTF3P20783 257 aa12.02□□□□□ -0.49
VARS2-204ENST00000467717 FHL2Q14192 279 aa12.02□□□□□ -0.49
VARS2-204ENST00000467717 RHEBQ15382 184 aa12.02□□□□□ -0.49
VARS2-204ENST00000467717 TWIST1Q15672 202 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms