RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
HDLBP-231ENST00000467435 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
HDLBP-231ENST00000467435 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 D6R8Y8 96 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 SPRY2O43597 315 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 NXPH4O95158 308 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 INSP01308 110 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 ORMDL3Q8N138 153 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 SPATA3Q8NHX4 192 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
HDLBP-231ENST00000467435 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-231ENST00000467435 CBY3A6NI87 242 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 RAB4AP20338 218 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 INSL3P51460 131 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
HDLBP-231ENST00000467435 Q8N1Y9 231 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 U3KQK5 164 aa9.03□□□□□ -0.96
HDLBP-231ENST00000467435 NCR2O95944 276 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 SMIM6P0DI80 62 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 EVI2AP22794 236 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 CKS2P33552 79 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 PRELID3AQ96N28 172 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 AP1S3Q96PC3 154 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 SAMD10Q9BYL1 202 aa9.02□□□□□ -0.97
HDLBP-231ENST00000467435 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 PMCHP20382 165 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 LINC00518Q8N0U6 118 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 MUC4Q99102 2169 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
HDLBP-231ENST00000467435 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 MDFICQ9P1T7 246 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 XCL2Q9UBD3 114 aa9.01□□□□□ -0.97
HDLBP-231ENST00000467435 HSBP1O75506 76 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 NPYP01303 97 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 PPBPP02775 128 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 AMTP48728 403 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
HDLBP-231ENST00000467435 NIT1Q86X76 327 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 PRIMA1Q86XR5 153 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 SYT8Q8NBV8 401 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 CHCHD1Q96BP2 118 aaKnown RBP9□□□□□ -0.97
HDLBP-231ENST00000467435 URB1-AS1Q96HZ7 61 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 LINC01587Q99440 93 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 SORL1Q92673 2214 aa9□□□□□ -0.97
HDLBP-231ENST00000467435 MGPP08493 103 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 HTN1P15515 57 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 RPL35AP18077 110 aaKnown RBP8.99□□□□□ -0.97
HDLBP-231ENST00000467435 ZNF415Q09FC8 603 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 C12orf57Q99622 126 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 ZNF747Q9BV97 191 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
HDLBP-231ENST00000467435 FA2HQ7L5A8 372 aa8.98□□□□□ -0.97
HDLBP-231ENST00000467435 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
HDLBP-231ENST00000467435 MRAP2Q96G30 205 aa8.98□□□□□ -0.97
HDLBP-231ENST00000467435 TMEM208Q9BTX3 173 aa8.98□□□□□ -0.97
HDLBP-231ENST00000467435 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
HDLBP-231ENST00000467435 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 GAS8-AS1O95177 125 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 LINC00614P0C842 121 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 GATA1P15976 413 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-231ENST00000467435 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 MORN3Q6PF18 240 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-231ENST00000467435 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 DEFB125Q8N687 156 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 C3orf56Q8N813 242 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
HDLBP-231ENST00000467435 IGHV3OR16-12A0A075B7B8 117 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 PRM2P04554 102 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 IGLL1P15814 213 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
HDLBP-231ENST00000467435 C12orf54Q6X4T0 127 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 Q6ZWC4 215 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 GSN-AS1Q9NRJ2 163 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.98
HDLBP-231ENST00000467435 SETD2Q9BYW2 2564 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-231ENST00000467435 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 GIG44P09565 113 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-231ENST00000467435 PMCHL1Q16048 86 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 SHISA2Q6UWI4 295 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 POM121L12Q8N7R1 296 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 NRACQ8N912 160 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 TMEM158Q8WZ71 300 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 JPT2Q9H910 190 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
HDLBP-231ENST00000467435 GOLT1BQ9Y3E0 138 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms