RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	FAM110A	Q9BQ89	295 aa		9.05	□□□□□ -0.96
HDLBP-231	ENST00000467435	C2CD3	Q4AC94	2353 aa		9.05	□□□□□ -0.96
HDLBP-231	ENST00000467435	TRGV11	A0A075B6L2	103 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	IGHV3-16	A0A0C4DH30	117 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435		D6R8Y8	96 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	SPRY2	O43597	315 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	NXPH4	O95158	308 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	INS	P01308	110 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	ORMDL3	Q8N138	153 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	OR10D4P	Q8NGN7	298 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	SPATA3	Q8NHX4	192 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	RNF185	Q96GF1	192 aa		9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	PACRG	Q96M98	296 aa	Predicted RBP	9.04	□□□□□ -0.96
HDLBP-231	ENST00000467435	CBY3	A6NI87	242 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	RAB4A	P20338	218 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	INSL3	P51460	131 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	RNASEK	Q6P5S7	137 aa	Known RBP	9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435		Q8N1Y9	231 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	C9orf85	Q96MD7	179 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	C20orf144	Q9BQM9	153 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	WFDC10A	Q9H1F0	79 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	C19orf73	Q9NVV2	129 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435		U3KQK5	164 aa		9.03	□□□□□ -0.96
HDLBP-231	ENST00000467435	NCR2	O95944	276 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	SMIM6	P0DI80	62 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	EVI2A	P22794	236 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	CKS2	P33552	79 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	PRELID3A	Q96N28	172 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	AP1S3	Q96PC3	154 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	SAMD10	Q9BYL1	202 aa		9.02	□□□□□ -0.97
HDLBP-231	ENST00000467435	SMKR1	H3BMG3	65 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	PMCH	P20382	165 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	LINC00518	Q8N0U6	118 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	MUC4	Q99102	2169 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	MCRIP2	Q9BUT9	160 aa	Known RBP	9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	DPH3P1	Q9H4G8	78 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	MDFIC	Q9P1T7	246 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	XCL2	Q9UBD3	114 aa		9.01	□□□□□ -0.97
HDLBP-231	ENST00000467435	HSBP1	O75506	76 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	NPY	P01303	97 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	PPBP	P02775	128 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	AMT	P48728	403 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	NUTF2	P61970	127 aa	Known RBP	9	□□□□□ -0.97
HDLBP-231	ENST00000467435	NIT1	Q86X76	327 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	PRIMA1	Q86XR5	153 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	SYT8	Q8NBV8	401 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	CHCHD1	Q96BP2	118 aa	Known RBP	9	□□□□□ -0.97
HDLBP-231	ENST00000467435	URB1-AS1	Q96HZ7	61 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	LINC01587	Q99440	93 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	LINC00467	Q9BRT7	94 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	SORL1	Q92673	2214 aa		9	□□□□□ -0.97
HDLBP-231	ENST00000467435	MGP	P08493	103 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	HTN1	P15515	57 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	RPL35A	P18077	110 aa	Known RBP	8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	ZNF415	Q09FC8	603 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	GTSCR1	Q86UQ5	136 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	C12orf57	Q99622	126 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	ZNF747	Q9BV97	191 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	LAMTOR2	Q9Y2Q5	125 aa		8.99	□□□□□ -0.97
HDLBP-231	ENST00000467435	FA2H	Q7L5A8	372 aa		8.98	□□□□□ -0.97
HDLBP-231	ENST00000467435	C14orf178	Q8N769	122 aa	Predicted RBP	8.98	□□□□□ -0.97
HDLBP-231	ENST00000467435	MRAP2	Q96G30	205 aa		8.98	□□□□□ -0.97
HDLBP-231	ENST00000467435	TMEM208	Q9BTX3	173 aa		8.98	□□□□□ -0.97
HDLBP-231	ENST00000467435	MAP1LC3A	Q9H492	121 aa		8.98	□□□□□ -0.97
HDLBP-231	ENST00000467435	TRAV26-2	A0A0B4J265	109 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	LOC389332	A0A1B0GUA5	103 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	GAS8-AS1	O95177	125 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	LINC00614	P0C842	121 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	SMIM17	P0DL12	118 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	GATA1	P15976	413 aa	Predicted RBP	8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	PYY3	Q5JQD4	70 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	MORN3	Q6PF18	240 aa	Predicted RBP	8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	C1orf158	Q8N1D5	194 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	FAM19A2	Q8N3H0	131 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	DEFB125	Q8N687	156 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	C3orf56	Q8N813	242 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	PRSS3P2	Q8NHM4	247 aa		8.97	□□□□□ -0.97
HDLBP-231	ENST00000467435	IGHV3OR16-12	A0A075B7B8	117 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	TNFRSF6B	O95407	300 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	PRM2	P04554	102 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	IGLL1	P15814	213 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	IFI27	P40305	119 aa	Predicted RBP	8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	C12orf54	Q6X4T0	127 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435		Q6ZWC4	215 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	WFDC9	Q8NEX5	89 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	GSN-AS1	Q9NRJ2	163 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	KIF25-AS1	Q9Y6Z4	181 aa		8.96	□□□□□ -0.98
HDLBP-231	ENST00000467435	SETD2	Q9BYW2	2564 aa	Predicted RBP	8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	IGHV1-24	A0A0C4DH33	117 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	GIG44	P09565	113 aa	Predicted RBP	8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	PMCHL1	Q16048	86 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	SHISA2	Q6UWI4	295 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	POM121L12	Q8N7R1	296 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	NRAC	Q8N912	160 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	C11orf72	Q8NBR9	251 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	TMEM158	Q8WZ71	300 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	C1QTNF4	Q9BXJ3	329 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	JPT2	Q9H910	190 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	AP5S1	Q9NUS5	200 aa		8.95	□□□□□ -0.98
HDLBP-231	ENST00000467435	GOLT1B	Q9Y3E0	138 aa		8.95	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms