RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 A0A1W2PPQ1 181 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 A8MWL6 223 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 H3BVH4 76 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 IGLC6P0CF74 106 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 WWC2-AS2Q96NR7 200 aa10.81□□□□□ -0.68
NPHP4-205ENST00000466897 FAM231BA6NCW3 169 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 Q6ZTI0 123 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 GFRA4Q9GZZ7 299 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 V9GYV3 84 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
NPHP4-205ENST00000466897 TRGV1A0A0A0MS02 117 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 F2Z2F3 143 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 NXPH4O95158 308 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 FOXA3P55318 350 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-205ENST00000466897 DAD1P61803 113 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
NPHP4-205ENST00000466897 CTRLP40313 264 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 ZFP82Q8N141 532 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 SYT8Q8NBV8 401 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 MRPL16Q9NX20 251 aaKnown RBP10.78□□□□□ -0.68
NPHP4-205ENST00000466897 PHLDA3Q9Y5J5 127 aa10.78□□□□□ -0.68
NPHP4-205ENST00000466897 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GAGE12BA1L429 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GAGE7O76087 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 MT-ND4LP03901 98 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 DEFB130BP0DP73 79 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 DEFB130AP0DP74 79 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 GZMBP10144 247 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 NANOS2P60321 138 aaKnown RBP10.77□□□□□ -0.69
NPHP4-205ENST00000466897 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
NPHP4-205ENST00000466897 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 CIDEAO60543 219 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 CACNG7P62955 275 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 Q6ZTC4 211 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 SLC7A5P1Q8MH63 180 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 GTSF1Q8WW33 167 aa10.76□□□□□ -0.69
NPHP4-205ENST00000466897 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 A8MWV9 139 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 ATP5G1P05496 136 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 RNF212Q495C1 297 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 OR10AG1Q8NH19 301 aa10.75□□□□□ -0.69
NPHP4-205ENST00000466897 TRAV10A0A0B4J240 114 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 SMIM27A0A1W2PRY6 76 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 RHEBQ15382 184 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 SPANXN1Q5VSR9 72 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 MUC7Q8TAX7 377 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 CTDSP1Q9GZU7 261 aa10.74□□□□□ -0.69
NPHP4-205ENST00000466897 HIGD1CA8MV81 97 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 M0R381 172 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 RS1O15537 224 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 SVBPQ8N300 66 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 POM121L12Q8N7R1 296 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 TPPP3Q9BW30 176 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 TMEM242Q9NWH2 141 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
NPHP4-205ENST00000466897 A0A087WWC5 75 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 NUPR2A6NF83 97 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 ZFP2Q6ZN57 461 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-205ENST00000466897 FAM210BQ96KR6 192 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 DNAH7Q8WXX0 4024 aa10.72□□□□□ -0.69
NPHP4-205ENST00000466897 DEFB131BA0A096LNP1 70 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 RHODO00212 210 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 SNAPINO95295 136 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 APOC3P02656 99 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 UFSP1Q6NVU6 142 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
NPHP4-205ENST00000466897 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 C7orf77A4D0Y5 90 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 NTF3P20783 257 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 SLAQ13239 276 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 CEMP1Q6PRD7 247 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-205ENST00000466897 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 ZNF479Q96JC4 524 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
NPHP4-205ENST00000466897 C3orf84H3BNL1 204 aa10.69□□□□□ -0.7
NPHP4-205ENST00000466897 TRGC1P0CF51 173 aa10.69□□□□□ -0.7
NPHP4-205ENST00000466897 HOXA5P20719 270 aa10.69□□□□□ -0.7
NPHP4-205ENST00000466897 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
NPHP4-205ENST00000466897 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
NPHP4-205ENST00000466897 A0A1B0GW15 77 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms