RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OVOL1O14753 267 aa13.96□□□□□ -0.18
CAPN3-209ENST00000466222 MRPL51Q4U2R6 128 aaKnown RBP13.96□□□□□ -0.18
CAPN3-209ENST00000466222 C12orf54Q6X4T0 127 aa13.96□□□□□ -0.18
CAPN3-209ENST00000466222 CNFNQ9BYD5 112 aa13.96□□□□□ -0.18
CAPN3-209ENST00000466222 PPP1R14DQ9NXH3 145 aa13.96□□□□□ -0.18
CAPN3-209ENST00000466222 SIGLEC8Q9NYZ4 499 aa13.96□□□□□ -0.18
CAPN3-209ENST00000466222 TMSB15BA0A087X1C1 80 aa13.95□□□□□ -0.18
CAPN3-209ENST00000466222 FABP5P3A8MUU1 101 aa13.95□□□□□ -0.18
CAPN3-209ENST00000466222 DEFB1P60022 68 aa13.95□□□□□ -0.18
CAPN3-209ENST00000466222 AMN1Q8IY45 258 aa13.95□□□□□ -0.18
CAPN3-209ENST00000466222 MRPL53Q96EL3 112 aaKnown RBP13.95□□□□□ -0.18
CAPN3-209ENST00000466222 C20orf173Q96LM9 149 aa13.95□□□□□ -0.18
CAPN3-209ENST00000466222 PPBPP02775 128 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 IFI27P40305 119 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-209ENST00000466222 VGLL1Q99990 258 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 SOCS3O14543 225 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 LGALS9BQ3B8N2 356 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 LGALS9CQ6DKI2 356 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 C16orf92Q96LL3 132 aa13.94□□□□□ -0.18
CAPN3-209ENST00000466222 HIST1H1AQ02539 215 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-209ENST00000466222 LINC01559Q495D7 138 aa13.93□□□□□ -0.18
CAPN3-209ENST00000466222 COL6A5A8TX70 2615 aa13.93□□□□□ -0.18
CAPN3-209ENST00000466222 HBDP02042 147 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 PF4P02776 101 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 ZNF80P51504 273 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-209ENST00000466222 TWIST1Q15672 202 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 DCANP1Q8TF63 244 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 A0A096LNJ9 63 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 COX8AP10176 69 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 CKS2P33552 79 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 TMEM61Q8N0U2 210 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 Q8TAT8 98 aa13.92□□□□□ -0.18
CAPN3-209ENST00000466222 STAB1Q9NY15 2570 aa13.91□□□□□ -0.18
CAPN3-209ENST00000466222 DEFB114Q30KQ6 69 aa13.91□□□□□ -0.18
CAPN3-209ENST00000466222 CD300EQ496F6 205 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-209ENST00000466222 UBE2V1Q13404 147 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 BVES-AS1Q5T3Y7 98 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 DYNLRB2Q8TF09 96 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 LINC01546A6NGU7 62 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 H0Y8G0 127 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 ORM1P02763 201 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 MPV17L2Q567V2 206 aa13.9□□□□□ -0.18
CAPN3-209ENST00000466222 TIMM8BQ9Y5J9 83 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-209ENST00000466222 LOC389332A0A1B0GUA5 103 aa13.89□□□□□ -0.19
CAPN3-209ENST00000466222 SAP30O75446 220 aa13.89□□□□□ -0.19
CAPN3-209ENST00000466222 PTTG1IPP53801 180 aa13.89□□□□□ -0.19
CAPN3-209ENST00000466222 PSMG4Q5JS54 123 aa13.89□□□□□ -0.19
CAPN3-209ENST00000466222 MAP1LC3AQ9H492 121 aa13.89□□□□□ -0.19
CAPN3-209ENST00000466222 NUDT3O95989 172 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 ERCC8Q13216 396 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 F6UB75 175 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 NPYP01303 97 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 ZNF688P0C7X2 276 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 DEFB125Q8N687 156 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 OR8A1Q8NGG7 326 aa13.88□□□□□ -0.19
CAPN3-209ENST00000466222 NCR2O95944 276 aa13.87□□□□□ -0.19
CAPN3-209ENST00000466222 C3orf56Q8N813 242 aa13.87□□□□□ -0.19
CAPN3-209ENST00000466222 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
CAPN3-209ENST00000466222 K7EQG2 157 aa13.86□□□□□ -0.19
CAPN3-209ENST00000466222 ZNF575Q86XF7 245 aa13.86□□□□□ -0.19
CAPN3-209ENST00000466222 MCRIP2Q9BUT9 160 aaKnown RBP13.86□□□□□ -0.19
CAPN3-209ENST00000466222 NXT2Q9NPJ8 142 aaKnown RBP13.86□□□□□ -0.19
CAPN3-209ENST00000466222 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
CAPN3-209ENST00000466222 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
CAPN3-209ENST00000466222 TMEM78Q5T7P6 136 aa13.85□□□□□ -0.19
CAPN3-209ENST00000466222 CCL25O15444 150 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 C9orf47Q6ZRZ4 202 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 ANK2Q01484 3957 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 TAX1BP3O14907 124 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
CAPN3-209ENST00000466222 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 SIVA1O15304 175 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 SEC11AP67812 179 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 MUC21Q5SSG8 566 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 C2orf91Q6ZV80 131 aa13.83□□□□□ -0.2
CAPN3-209ENST00000466222 SMKR1H3BMG3 65 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 CACNG7P62955 275 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 SMIM15Q7Z3B0 74 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 TP73-AS1Q9UF72 201 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-209ENST00000466222 IGLV1-51P01701 117 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 FGF6P10767 208 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 FCER1GP30273 86 aa13.82□□□□□ -0.2
CAPN3-209ENST00000466222 PKD1L1Q8TDX9 2849 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 TNFRSF6BO95407 300 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 ID1P41134 155 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 BOD1L2Q8IYS8 172 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 MDFIQ99750 246 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 CBY1Q9Y3M2 126 aa13.81□□□□□ -0.2
CAPN3-209ENST00000466222 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 IGKV3D-20A0A0C4DH25 116 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 PRSS47A8MTI9 375 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 ANKRD39Q53RE8 183 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 MSRB1Q9NZV6 116 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 SNRPD3P62318 126 aaKnown RBP13.8□□□□□ -0.2
CAPN3-209ENST00000466222 VAMP3Q15836 100 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms