RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 D6R8Y8 96 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 H3BVH4 76 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 M0R2Z0 102 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 NCR2O95944 276 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 PMCHL1Q16048 86 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 ANXA2RQ3ZCQ2 193 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 OR9G4Q8NGQ1 327 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 OR10AG1Q8NH19 301 aa6.18□□□□□ -1.42
UBE4B-205ENST00000465408 A0A0J9YX75 114 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 LOC389332A0A1B0GUA5 103 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 LINC00587B1AMM8 73 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 C3orf84H3BNL1 204 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 LEPP41159 167 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 SNRPD3P62318 126 aaKnown RBP6.17□□□□□ -1.42
UBE4B-205ENST00000465408 S100A12P80511 92 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
UBE4B-205ENST00000465408 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 Q8N976 141 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 DYNLRB2Q8TF09 96 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 PRELID3AQ96N28 172 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 CNFNQ9BYD5 112 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 C16orf95Q9H693 158 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 PEMTQ9UBM1 199 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 U3KQK5 164 aa6.17□□□□□ -1.42
UBE4B-205ENST00000465408 TRAV12-3A0A0B4J271 114 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 KNCNA6PVL3 124 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 GNRH2O43555 120 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 SNAI2O43623 268 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 GAS8-AS1O95177 125 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 C3orf79P0CE67 100 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 ASIPP42127 132 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 SCGB2A2Q13296 93 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 SAMD5Q5TGI4 173 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 ORMDL3Q8N138 153 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
UBE4B-205ENST00000465408 CHCHD1Q96BP2 118 aaKnown RBP6.16□□□□□ -1.42
UBE4B-205ENST00000465408 CITED2Q99967 270 aaPredicted RBP6.16□□□□□ -1.42
UBE4B-205ENST00000465408 TRAV12-2A0A075B6T6 113 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 TRBV7-9A0A0J9YWB2 115 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 C7orf71A4D174 169 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 KLLNB2CW77 178 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 M0R381 172 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 NPYP01303 97 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 OR5AL1P0C617 328 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 GATA1P15976 413 aaPredicted RBP6.15□□□□□ -1.42
UBE4B-205ENST00000465408 RAB4AP20338 218 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 S100A4P26447 101 aaKnown RBP6.15□□□□□ -1.42
UBE4B-205ENST00000465408 CKS2P33552 79 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 FXYD7P58549 80 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 DEFB131AP59861 70 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 CACNG7P62955 275 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 ZNF124Q15973 351 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 SPANXN1Q5VSR9 72 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 LINC00173Q6ZV60 143 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 FA2HQ7L5A8 372 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 CITED1Q99966 193 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 SIGLEC8Q9NYZ4 499 aa6.15□□□□□ -1.42
UBE4B-205ENST00000465408 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.43
UBE4B-205ENST00000465408 HERC1Q15751 4861 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 CCL24O00175 119 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 DUSP14O95147 198 aaKnown RBP6.14□□□□□ -1.43
UBE4B-205ENST00000465408 LINC00614P0C842 121 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 EVI2AP22794 236 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
UBE4B-205ENST00000465408 PKIAP61925 76 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 DEFB114Q30KQ6 69 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 CASC10Q5T4H9 136 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 FOXI2Q6ZQN5 318 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 SMIM15Q7Z3B0 74 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 SPATA12Q7Z6I5 190 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 ZNF664Q8N3J9 261 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 ODF3Q96PU9 254 aa6.14□□□□□ -1.43
UBE4B-205ENST00000465408 TSSC4Q9Y5U2 329 aaPredicted RBP6.14□□□□□ -1.43
UBE4B-205ENST00000465408 IGHV4-4A0A075B6R2 117 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 TRAV26-2A0A0B4J265 109 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 NDUFA7O95182 113 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 RNASE3P12724 160 aaKnown RBP6.13□□□□□ -1.43
UBE4B-205ENST00000465408 FHL3Q13643 280 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 TDRG1Q3Y452 100 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 CD300EQ496F6 205 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-205ENST00000465408 FAM159AQ6UWV7 190 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 AMTNQ6UX39 209 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 TEX43Q6ZNM6 134 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 PHLDA3Q9Y5J5 127 aa6.13□□□□□ -1.43
UBE4B-205ENST00000465408 TRAV2A0A0B4J234 112 aa6.12□□□□□ -1.43
UBE4B-205ENST00000465408 TSTD3H0UI37 97 aa6.12□□□□□ -1.43
UBE4B-205ENST00000465408 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
UBE4B-205ENST00000465408 CD7P09564 240 aa6.12□□□□□ -1.43
UBE4B-205ENST00000465408 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms