RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ADAMTSL5Q6ZMM2 481 aa16.27■□□□□ 0.2
PDLIM2-216ENST00000464275 SONP18583 2426 aaKnown RBP16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 H0Y8G0 127 aa16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 MPV17L2Q567V2 206 aa16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 BVES-AS1Q5T3Y7 98 aa16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 ODF3Q96PU9 254 aa16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 TIMM8BQ9Y5J9 83 aaPredicted RBP16.27■□□□□ 0.19
PDLIM2-216ENST00000464275 IGHV4-4A0A075B6R2 117 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 KLLNB2CW77 178 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 NPYP01303 97 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 UBE2V1Q13404 147 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 RNF185Q96GF1 192 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 NUDT3O95989 172 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 OR9G4Q8NGQ1 327 aa16.26■□□□□ 0.19
PDLIM2-216ENST00000464275 A0A0J9YX75 114 aa16.25■□□□□ 0.19
PDLIM2-216ENST00000464275 DEFB125Q8N687 156 aa16.25■□□□□ 0.19
PDLIM2-216ENST00000464275 IFI27L1Q96BM0 104 aa16.25■□□□□ 0.19
PDLIM2-216ENST00000464275 C16orf95Q9H693 158 aa16.25■□□□□ 0.19
PDLIM2-216ENST00000464275 LEPP41159 167 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 PTTG1IPP53801 180 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 ANXA2RQ3ZCQ2 193 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 ITPR2Q14571 2701 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 H3BVH4 76 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 NCR2O95944 276 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 MED14OSP0DP75 135 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 SMIM15Q7Z3B0 74 aa16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 ZNF418Q8TF45 676 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-216ENST00000464275 ASIPP42127 132 aa16.23■□□□□ 0.19
PDLIM2-216ENST00000464275 KIR3DS1Q14943 382 aa16.23■□□□□ 0.19
PDLIM2-216ENST00000464275 SPANXN1Q5VSR9 72 aa16.23■□□□□ 0.19
PDLIM2-216ENST00000464275 DUX3Q96PT4 197 aa16.23■□□□□ 0.19
PDLIM2-216ENST00000464275 UNC79Q9P2D8 2635 aa16.22■□□□□ 0.19
PDLIM2-216ENST00000464275 DUSP14O95147 198 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-216ENST00000464275 DLX4Q92988 240 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-216ENST00000464275 TRAV2A0A0B4J234 112 aa16.22■□□□□ 0.19
PDLIM2-216ENST00000464275 MCRIP2Q9BUT9 160 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-216ENST00000464275 SIVA1O15304 175 aa16.21■□□□□ 0.19
PDLIM2-216ENST00000464275 S100A4P26447 101 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-216ENST00000464275 FCER1GP30273 86 aa16.21■□□□□ 0.19
PDLIM2-216ENST00000464275 SEC11AP67812 179 aa16.21■□□□□ 0.19
PDLIM2-216ENST00000464275 AGRNO00468 2067 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 PRSS47A8MTI9 375 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 FOXI2Q6ZQN5 318 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 SMKR1H3BMG3 65 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 TNFRSF6BO95407 300 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 HILS1P60008 231 aa16.2■□□□□ 0.18
PDLIM2-216ENST00000464275 C7orf71A4D174 169 aa16.19■□□□□ 0.18
PDLIM2-216ENST00000464275 CCL25O15444 150 aa16.19■□□□□ 0.18
PDLIM2-216ENST00000464275 C2orf91Q6ZV80 131 aa16.19■□□□□ 0.18
PDLIM2-216ENST00000464275 LINC01006Q8NI28 216 aa16.19■□□□□ 0.18
PDLIM2-216ENST00000464275 AKAP9Q99996 3911 aa16.19■□□□□ 0.18
PDLIM2-216ENST00000464275 TAX1BP3O14907 124 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 CD28P10747 220 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 FGF6P10767 208 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 EVI2AP22794 236 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 BOD1L2Q8IYS8 172 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 DYNLRB2Q8TF09 96 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 ACANP16112 2415 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 MYO9AB2RTY4 2548 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 Q8N8P6 123 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 RAX2Q96IS3 184 aa16.18■□□□□ 0.18
PDLIM2-216ENST00000464275 ANK3Q12955 4377 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 GNRH2O43555 120 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 FAM159AQ6UWV7 190 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 FHL3Q13643 280 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 HIST2H2BDQ6DRA6 164 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 SMR3AQ99954 134 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 PHLDA3Q9Y5J5 127 aa16.17■□□□□ 0.18
PDLIM2-216ENST00000464275 TRAV12-3A0A0B4J271 114 aa16.16■□□□□ 0.18
PDLIM2-216ENST00000464275 ANKRD39Q53RE8 183 aa16.16■□□□□ 0.18
PDLIM2-216ENST00000464275 TMEM61Q8N0U2 210 aa16.16■□□□□ 0.18
PDLIM2-216ENST00000464275 TP73-AS1Q9UF72 201 aa16.16■□□□□ 0.18
PDLIM2-216ENST00000464275 TSSC4Q9Y5U2 329 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-216ENST00000464275 IGKV3-20P01619 116 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 RNASE3P12724 160 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 CDKN1BP46527 198 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 TMEM97Q5BJF2 176 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 C11orf44Q8N8P7 122 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 ATP5LO75964 103 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 LY6G6DO95868 133 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 VAMP3Q15836 100 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 DEFB114Q30KQ6 69 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 OR2K2Q8NGT1 345 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 JMJD8Q96S16 334 aa16.15■□□□□ 0.18
PDLIM2-216ENST00000464275 MUC4Q99102 2169 aa16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 A0A1W2PRX2 142 aa16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 CCL24O00175 119 aa16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 CITED2Q99967 270 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 HECTD1Q9ULT8 2610 aa16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 SORL1Q92673 2214 aa16.14■□□□□ 0.17
PDLIM2-216ENST00000464275 K7EP13 123 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 M0R381 172 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 NDUFA7O95182 113 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 DEFB131AP59861 70 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 MRAP2Q96G30 205 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 ZMAT4Q9H898 229 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 HSD52Q0P140 79 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 AMTNQ6UX39 209 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 CBY1Q9Y3M2 126 aa16.13■□□□□ 0.17
PDLIM2-216ENST00000464275 IGLV2-18A0A075B6J9 118 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms