RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PPT1P50897 306 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 LINC01556Q5JQF7 62 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 NHLRC2Q8NBF2 726 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 LINC00479Q96M42 142 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 ARL2-SNX15V9GYD0 113 aa13.87□□□□□ -0.19
PDLIM4-205ENST00000463615 IGKV3D-20A0A0C4DH25 116 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 FAM74A7A6NL05 159 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 FABP5P3A8MUU1 101 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 CRYGDP07320 174 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 MGST1P10620 155 aaKnown RBP13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 CYTL1Q9NRR1 136 aa13.86□□□□□ -0.19
PDLIM4-205ENST00000463615 TRAV34A0A0B4J273 112 aa13.85□□□□□ -0.19
PDLIM4-205ENST00000463615 PEX7O00628 323 aa13.85□□□□□ -0.19
PDLIM4-205ENST00000463615 DNLZQ5SXM8 178 aa13.85□□□□□ -0.19
PDLIM4-205ENST00000463615 AKR1C8PQ5T2L2 129 aa13.85□□□□□ -0.19
PDLIM4-205ENST00000463615 ZFP2Q6ZN57 461 aa13.85□□□□□ -0.19
PDLIM4-205ENST00000463615 IFNA7P01567 189 aa13.84□□□□□ -0.19
PDLIM4-205ENST00000463615 RGS21Q2M5E4 152 aa13.84□□□□□ -0.19
PDLIM4-205ENST00000463615 Q86TA4 180 aa13.84□□□□□ -0.19
PDLIM4-205ENST00000463615 TCEAL7Q9BRU2 100 aa13.84□□□□□ -0.19
PDLIM4-205ENST00000463615 TRAV8-6A0A0B4J262 113 aa13.83□□□□□ -0.2
PDLIM4-205ENST00000463615 A8MWV9 139 aa13.83□□□□□ -0.2
PDLIM4-205ENST00000463615 LELP1Q5T871 98 aa13.83□□□□□ -0.2
PDLIM4-205ENST00000463615 IL36BQ9NZH7 164 aa13.83□□□□□ -0.2
PDLIM4-205ENST00000463615 ZFP30Q9Y2G7 519 aa13.83□□□□□ -0.2
PDLIM4-205ENST00000463615 TRBV6-1A0A0K0K1D8 114 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 IBA57-AS1B1ANH7 110 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 FHITP49789 147 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 UBE2G2P60604 165 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 PARLQ9H300 379 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 SCRT2Q9NQ03 307 aa13.82□□□□□ -0.2
PDLIM4-205ENST00000463615 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 ARPC5O15511 151 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 LINC00694P0DN24 101 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 ASIPP42127 132 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 CRIP1P50238 77 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 FGF8P55075 233 aaPredicted RBP13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 UFSP1Q6NVU6 142 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 GTSF1LQ9H1H1 148 aa13.81□□□□□ -0.2
PDLIM4-205ENST00000463615 IGHV3-73A0A0B4J1V6 119 aa13.8□□□□□ -0.2
PDLIM4-205ENST00000463615 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
PDLIM4-205ENST00000463615 ATP6V0E2Q8NHE4 81 aa13.8□□□□□ -0.2
PDLIM4-205ENST00000463615 FMC1Q96HJ9 113 aa13.8□□□□□ -0.2
PDLIM4-205ENST00000463615 ZNF345Q14585 488 aa13.79□□□□□ -0.2
PDLIM4-205ENST00000463615 OR10J3Q5JRS4 329 aa13.79□□□□□ -0.2
PDLIM4-205ENST00000463615 Q6ZSN1 163 aa13.79□□□□□ -0.2
PDLIM4-205ENST00000463615 ZC2HC1AQ96GY0 325 aa13.79□□□□□ -0.2
PDLIM4-205ENST00000463615 B4DEV8 164 aa13.78□□□□□ -0.2
PDLIM4-205ENST00000463615 KRBOX1C9JBD0 128 aa13.78□□□□□ -0.2
PDLIM4-205ENST00000463615 STOML3Q8TAV4 291 aa13.78□□□□□ -0.2
PDLIM4-205ENST00000463615 LRCOL1A6NCL2 159 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 XGP55808 180 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 LAGE3Q14657 143 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 ZNF674Q2M3X9 581 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 KCNRGQ8N5I3 272 aa13.77□□□□□ -0.21
PDLIM4-205ENST00000463615 SH2D1AO60880 128 aa13.76□□□□□ -0.21
PDLIM4-205ENST00000463615 LTAP01374 205 aa13.76□□□□□ -0.21
PDLIM4-205ENST00000463615 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM4-205ENST00000463615 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
PDLIM4-205ENST00000463615 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
PDLIM4-205ENST00000463615 RHODO00212 210 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 ARMS2P0C7Q2 107 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 SEC11BP0C7V7 166 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 KRTAP10-1P60331 282 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 UBE2G1P62253 170 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 MBD3L1Q8WWY6 194 aa13.75□□□□□ -0.21
PDLIM4-205ENST00000463615 HMSDA8MTL9 139 aa13.74□□□□□ -0.21
PDLIM4-205ENST00000463615 UMAD1C9J7I0 102 aa13.74□□□□□ -0.21
PDLIM4-205ENST00000463615 H3BVH4 76 aa13.74□□□□□ -0.21
PDLIM4-205ENST00000463615 SAMD10Q9BYL1 202 aa13.74□□□□□ -0.21
PDLIM4-205ENST00000463615 JPT2Q9H910 190 aa13.74□□□□□ -0.21
PDLIM4-205ENST00000463615 FAT1Q14517 4588 aa13.73□□□□□ -0.21
PDLIM4-205ENST00000463615 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
PDLIM4-205ENST00000463615 A0A087WWC5 75 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GAGE12JA6NER3 117 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 M0R036 132 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 PSCAO43653 123 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GCSHP23434 173 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GAGE1Q13065 139 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GAGE4Q13068 117 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GAGE5Q13069 117 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 GAGE13Q4V321 117 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
PDLIM4-205ENST00000463615 SMLR1H3BR10 107 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 IGHV3-30P01768 117 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 IGHV3-33P01772 117 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 S100A9P06702 114 aaKnown RBP13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 IGHV3-30-3P0DP02 117 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 IGHV3-30-5P0DP03 117 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 C14orf178Q8N769 122 aaPredicted RBP13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 Q9UF83 564 aa13.71□□□□□ -0.21
PDLIM4-205ENST00000463615 A0A0D9SG52 128 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 350.3 ms