RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PRB1P04280 392 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 OR10J4P0C629 311 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 FABP2P12104 132 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 RPL7P18124 248 aaKnown RBP1.67□□□□□ -2.14
VRK2-208ENST00000463222 THEM6Q8WUY1 208 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 RAB37Q96AX2 223 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 LRTM1Q9HBL6 345 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 TAS2R7Q9NYW3 318 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 SOX21Q9Y651 276 aaPredicted RBP1.67□□□□□ -2.14
VRK2-208ENST00000463222 CHCHD2Q9Y6H1 151 aaPredicted RBP1.67□□□□□ -2.14
VRK2-208ENST00000463222 SPTBN2O15020 2390 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 IGF2RP11717 2491 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 KALRNO60229 2985 aa1.67□□□□□ -2.14
VRK2-208ENST00000463222 SPENQ96T58 3664 aaKnown RBP1.67□□□□□ -2.14
VRK2-208ENST00000463222 PKD1L2Q7Z442 2459 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 PTPRZ1P23471 2315 aaPredicted RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 CFAP46Q8IYW2 2715 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 OR2T8A6NH00 312 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 MT-ND6P03923 174 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 CXCL8P10145 99 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 BCL2P10415 239 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 HMGA1P17096 107 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 RAB5CP51148 216 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 POLR2HP52434 150 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 CNBPP62633 177 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 CDK6Q00534 326 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 EIF3IQ13347 325 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 PHF5AQ7RTV0 110 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 ISOC1Q96CN7 298 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 MUCL1Q96DR8 90 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 TRAPPC2LQ9UL33 140 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 LAMTOR2Q9Y2Q5 125 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 ZFC3H1O60293 1989 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 TNRC6AQ8NDV7 1962 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 TPRP12270 2363 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 DSPP15924 2871 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 NBEAQ8NFP9 2946 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 AKAP13Q12802 2813 aa1.66□□□□□ -2.14
VRK2-208ENST00000463222 DIDO1Q9BTC0 2240 aaKnown RBP1.66□□□□□ -2.14
VRK2-208ENST00000463222 BOD1L1Q8NFC6 3051 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 BSNQ9UPA5 3926 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 IGKV2-40A0A087WW87 121 aaPredicted RBP1.65□□□□□ -2.15
VRK2-208ENST00000463222 TRAV10A0A0B4J240 114 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 FAM92AA1XBS5 289 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 PRORSD1PA6NEY8 169 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 C10orf142B7Z368 130 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 IGKV2D-40P01614 121 aaPredicted RBP1.65□□□□□ -2.15
VRK2-208ENST00000463222 DSCR4P56555 118 aaPredicted RBP1.65□□□□□ -2.15
VRK2-208ENST00000463222 TMEM14EPQ6UXP3 125 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 ZNF720Q7Z2F6 126 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 DEFB119Q8N690 84 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 TCEAL4Q96EI5 215 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 CCDC115Q96NT0 180 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 TAF9BQ9HBM6 251 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 MED31Q9Y3C7 131 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 SNURFQ9Y675 71 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 MED13Q9UHV7 2174 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 MYH9P35579 1960 aaKnown RBP1.65□□□□□ -2.15
VRK2-208ENST00000463222 ATMQ13315 3056 aa1.65□□□□□ -2.15
VRK2-208ENST00000463222 PDCD11Q14690 1871 aaKnown RBP1.65□□□□□ -2.15
VRK2-208ENST00000463222 MAP1BP46821 2468 aaKnown RBP1.64□□□□□ -2.15
VRK2-208ENST00000463222 PATJQ8NI35 1801 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 E7EUB6 86 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 KPNA4O00629 521 aaPredicted RBP1.64□□□□□ -2.15
VRK2-208ENST00000463222 CCL16O15467 120 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 NBEAP1P0C6P0 100 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 C2orf82Q6UX34 121 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 TOMM20LQ6UXN7 152 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 TEX29Q8N6K0 151 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 FAM216BQ8N7L0 139 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 Q8TAT8 98 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 HYLS1Q96M11 299 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 TP53RKQ96S44 253 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 KIAA1549Q9HCM3 1950 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 FANCMQ8IYD8 2048 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 RELNP78509 3460 aa1.64□□□□□ -2.15
VRK2-208ENST00000463222 ANKRD11Q6UB99 2663 aaPredicted RBP1.63□□□□□ -2.15
VRK2-208ENST00000463222 CNOT1A5YKK6 2376 aaKnown RBP1.63□□□□□ -2.15
VRK2-208ENST00000463222 ANK1P16157 1881 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 IGSF10Q6WRI0 2623 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 MUC22E2RYF6 1773 aaPredicted RBP1.63□□□□□ -2.15
VRK2-208ENST00000463222 A0A087WX48 190 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 PVALEFA0A1B0GWK0 134 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 hDV103S1A0JD37 113 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 ERC2-IT1O76042 136 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 FAM107AO95990 144 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 RPS3P23396 243 aaKnown RBP eCLIP1.63□□□□□ -2.15
VRK2-208ENST00000463222 SDC2P34741 201 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
VRK2-208ENST00000463222 ZNF833PQ6ZTB9 187 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 C10orf105Q8TEF2 133 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 SKA2Q8WVK7 121 aaPredicted RBP1.63□□□□□ -2.15
VRK2-208ENST00000463222 C4orf3Q8WVX3 66 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 CACNA1BQ00975 2339 aa1.63□□□□□ -2.15
VRK2-208ENST00000463222 ASH1LQ9NR48 2969 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms