RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FXYD2P54710 66 aa12.73□□□□□ -0.37
ACTB-207ENST00000462494 GTF2H5Q6ZYL4 71 aa12.73□□□□□ -0.37
ACTB-207ENST00000462494 HIGD1BQ9P298 99 aa12.73□□□□□ -0.37
ACTB-207ENST00000462494 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 PLNP26678 52 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 TOMM6Q96B49 74 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
ACTB-207ENST00000462494 H7C1H1 209 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 SMIM13P0DJ93 91 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 MAPKAPK5-AS1Q8N8E1 139 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 DCANP1Q8TF63 244 aa12.72□□□□□ -0.37
ACTB-207ENST00000462494 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 PIEZO1Q92508 2521 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 K7EMT4 169 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 NEGR1Q7Z3B1 354 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 DEFB104AQ8WTQ1 72 aa12.71□□□□□ -0.37
ACTB-207ENST00000462494 CHTOPQ9Y3Y2 248 aaKnown RBP12.71□□□□□ -0.37
ACTB-207ENST00000462494 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 F8VRH5 84 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 IGKV3-20P01619 116 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 PSMB8P28062 276 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 C2orf66Q6UXQ4 117 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 MAPK1IP1LQ8NDC0 245 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 JPT2Q9H910 190 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 KLLNB2CW77 178 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 MUC4Q99102 2169 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 IGSF10Q6WRI0 2623 aa12.7□□□□□ -0.38
ACTB-207ENST00000462494 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 K7EMI3 77 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 K7ERJ3 54 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 CD7P09564 240 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 C21orf62-AS1Q17RA5 79 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 A0A1W2PPM0 123 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 K7EP34 96 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 SLC25A16P16260 332 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 CDKN1BP46527 198 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 UFSP1Q6NVU6 142 aa12.69□□□□□ -0.38
ACTB-207ENST00000462494 A0A087WWL8 130 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 GATA3P23771 443 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 PCP4P48539 62 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 HLA-DRB4P13762 266 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 CEND1Q8N111 149 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 NHP2Q9NX24 153 aaKnown RBP12.68□□□□□ -0.38
ACTB-207ENST00000462494 HLA-DRB4X5D2U9 266 aa12.68□□□□□ -0.38
ACTB-207ENST00000462494 F5H697 171 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 PPP1R17O96001 155 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 LINC01356Q8N9X3 169 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 BAALCQ8WXS3 180 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
ACTB-207ENST00000462494 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 DSCR9P59020 149 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 NXPH4O95158 308 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 TGFAP01135 160 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 FABP2P12104 132 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
ACTB-207ENST00000462494 MYO18BQ8IUG5 2567 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 LINC00315P59091 139 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 OR11H12B2RN74 326 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 SYNJ2BPP57105 145 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 SNRPD3P62318 126 aaKnown RBP12.65□□□□□ -0.38
ACTB-207ENST00000462494 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 OR11H1Q8NG94 326 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 DUX5Q96PT3 197 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 HIST1H4GQ99525 98 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 VPS25Q9BRG1 176 aa12.65□□□□□ -0.38
ACTB-207ENST00000462494 DOPEY2Q9Y3R5 2298 aa12.64□□□□□ -0.39
ACTB-207ENST00000462494 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
ACTB-207ENST00000462494 TM2D2Q9BX73 214 aa12.64□□□□□ -0.39
ACTB-207ENST00000462494 POM121L12Q8N7R1 296 aa12.64□□□□□ -0.39
ACTB-207ENST00000462494 ZNF580Q9UK33 172 aa12.63□□□□□ -0.39
ACTB-207ENST00000462494 USP9YO00507 2555 aaPredicted RBP12.63□□□□□ -0.39
ACTB-207ENST00000462494 ZANQ9Y493 2812 aa12.63□□□□□ -0.39
ACTB-207ENST00000462494 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 CYSLTR1Q9Y271 337 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 TP53TG1Q9Y2A0 90 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 A0A0J9YX75 114 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
ACTB-207ENST00000462494 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 A0A087WW49 117 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 K7ERU9 68 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 SAP30O75446 220 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 POLQO75417 2590 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 ANKRD17O75179 2603 aaKnown RBP12.61□□□□□ -0.39
ACTB-207ENST00000462494 AGRNO00468 2067 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 ZFP2Q6ZN57 461 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms