RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 FAM215AQ9Y5M1 114 aa6.19□□□□□ -1.42
ERCC8-204ENST00000462279 SORL1Q92673 2214 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 A0A0J9YY99 117 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 DEFB109BQ30KR1 87 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 TOMM6Q96B49 74 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 BDP1A6H8Y1 2624 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
ERCC8-204ENST00000462279 CTSGP08311 255 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 TMEM190Q8WZ59 177 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 SRD5A1P18405 259 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 HERVK_113P61574 105 aa6.18□□□□□ -1.42
ERCC8-204ENST00000462279 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 Q8N1Y9 231 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 C15orf53Q8NAA6 179 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 IGLV11-55A0A075B6I3 123 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 A4D1N5 150 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 IGF1P05019 195 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 COX6B1P14854 86 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 NDPQ00604 133 aa6.17□□□□□ -1.42
ERCC8-204ENST00000462279 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 TCF15Q12870 199 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 RNASE6Q93091 150 aaKnown RBP6.16□□□□□ -1.42
ERCC8-204ENST00000462279 PHLDA3Q9Y5J5 127 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 CLEC3BP05452 202 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 RPL39P62891 51 aaKnown RBP6.16□□□□□ -1.42
ERCC8-204ENST00000462279 TIMD4Q96H15 378 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 SLC50A1Q9BRV3 221 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 MAP1AP78559 2803 aaPredicted RBP6.16□□□□□ -1.42
ERCC8-204ENST00000462279 TLN1Q9Y490 2541 aaKnown RBP6.16□□□□□ -1.42
ERCC8-204ENST00000462279 ELANEP08246 267 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 DEFB1P60022 68 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 SRSF2Q01130 221 aaKnown RBP6.16□□□□□ -1.42
ERCC8-204ENST00000462279 MSRB2Q9Y3D2 182 aa6.16□□□□□ -1.42
ERCC8-204ENST00000462279 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
ERCC8-204ENST00000462279 ASIPP42127 132 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 FAM110AQ9BQ89 295 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 TTC28Q96AY4 2481 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 ECSCRQ19T08 205 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 NUP37Q8NFH4 326 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
ERCC8-204ENST00000462279 CD59P13987 128 aa6.15□□□□□ -1.43
ERCC8-204ENST00000462279 C15orf32Q32M92 178 aa6.15□□□□□ -1.43
ERCC8-204ENST00000462279 ZNF672Q499Z4 452 aaPredicted RBP6.15□□□□□ -1.43
ERCC8-204ENST00000462279 SBSPONQ8IVN8 264 aa6.15□□□□□ -1.43
ERCC8-204ENST00000462279 DOPEY2Q9Y3R5 2298 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 IGKV3-7A0A075B6H7 116 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 F5H697 171 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 CRYGDP07320 174 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 PRSS2P07478 247 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 PRR9Q5T870 116 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 SLC25A29Q8N8R3 303 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 DPM3Q9P2X0 92 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 NOTCH3Q9UM47 2321 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 J3QQQ9 107 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 BUB3O43684 328 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■■□□□ 13.9
ERCC8-204ENST00000462279 CHCHD5Q9BSY4 110 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 DPH3P1Q9H4G8 78 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 KAAG1Q9UBP8 84 aa6.14□□□□□ -1.43
ERCC8-204ENST00000462279 IGHV3-33P01772 117 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 ZNF56Q15929 161 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 CLEC19AQ6UXS0 136 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 FAM57AQ8TBR7 257 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 C16orf92Q96LL3 132 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
ERCC8-204ENST00000462279 IGLV4-69A0A075B6H9 119 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 ADARB2-AS1A8MUL3 147 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 LY6HO94772 140 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 RNF5Q99942 180 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
ERCC8-204ENST00000462279 MUC4Q99102 2169 aa6.13□□□□□ -1.43
ERCC8-204ENST00000462279 BRI3O95415 125 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 TSHBP01222 138 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 FOXC1Q12948 553 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 PMVKQ15126 192 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 ATXN8Q156A1 80 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 H3BMM0 161 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 GNRH2O43555 120 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 NPC2P61916 151 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 RPL11P62913 178 aaKnown RBP6.12□□□□□ -1.43
ERCC8-204ENST00000462279 OR10J6PQ8NGY7 276 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 ZNRF2Q8NHG8 242 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 DUX3Q96PT4 197 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 ZNF256Q9Y2P7 627 aaPredicted RBP6.12□□□□□ -1.43
ERCC8-204ENST00000462279 AKAP13Q12802 2813 aa6.12□□□□□ -1.43
ERCC8-204ENST00000462279 A0A087WWL8 130 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms