RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 COMMD7Q86VX2 200 aa7.96□□□□□ -1.13
SSBP1-202ENST00000461433 PTH2Q96A98 100 aa7.96□□□□□ -1.13
SSBP1-202ENST00000461433 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.13
SSBP1-202ENST00000461433 NAT8Q9UHE5 227 aa7.96□□□□□ -1.13
SSBP1-202ENST00000461433 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.13
SSBP1-202ENST00000461433 NACAE9PAV3 2078 aa7.96□□□□□ -1.14
SSBP1-202ENST00000461433 DEFB131BA0A096LNP1 70 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 TRAV10A0A0B4J240 114 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 GZMBP10144 247 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 S100A4P26447 101 aaKnown RBP7.95□□□□□ -1.14
SSBP1-202ENST00000461433 CASC10Q5T4H9 136 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 CEMP1Q6PRD7 247 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-202ENST00000461433 POM121L12Q8N7R1 296 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 OR2D3Q8NGH3 330 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 LCE2BO14633 110 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 IGLC6P0CF74 106 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
SSBP1-202ENST00000461433 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
SSBP1-202ENST00000461433 TRGV2A0A075B6R0 118 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 TMEM218A2RU14 115 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 SNAI2O43623 268 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 ATP5G1P05496 136 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 ADCYAP1P18509 176 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 HOXA5P20719 270 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 ERVFC1-1P60608 527 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 RPS20P60866 119 aaKnown RBP7.94□□□□□ -1.14
SSBP1-202ENST00000461433 ZNF876PQ49A33 203 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 DMRTA1Q5VZB9 504 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 OSTCQ9NRP0 149 aa7.94□□□□□ -1.14
SSBP1-202ENST00000461433 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
SSBP1-202ENST00000461433 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
SSBP1-202ENST00000461433 HTN3P15516 51 aa7.93□□□□□ -1.14
SSBP1-202ENST00000461433 ADIRFQ15847 76 aa7.93□□□□□ -1.14
SSBP1-202ENST00000461433 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
SSBP1-202ENST00000461433 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
SSBP1-202ENST00000461433 NXPH4O95158 308 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 PIK3CD-AS1Q5SR53 167 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 OR10AG1Q8NH19 301 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 GTSF1Q8WW33 167 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 SFRP2Q96HF1 295 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 ZNF479Q96JC4 524 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 NDUFAF3Q9BU61 184 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 V9GYV3 84 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 MUC21A0A0G2JKD1 596 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 MUC21A0A140T8X8 626 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 F5H768 121 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 RS1O15537 224 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 IGHV3-53P01767 116 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 FHL2Q14192 279 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 CT83Q5H943 113 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 CFAP126Q5VTH2 177 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 FER1L6-AS1Q8NA97 138 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 JPT2Q9H910 190 aa7.92□□□□□ -1.14
SSBP1-202ENST00000461433 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
SSBP1-202ENST00000461433 XKRY2A2RUG3 117 aa7.91□□□□□ -1.14
SSBP1-202ENST00000461433 LYZL1Q6UWQ5 148 aa7.91□□□□□ -1.14
SSBP1-202ENST00000461433 TENM2Q9NT68 2774 aa7.91□□□□□ -1.14
SSBP1-202ENST00000461433 A8MWL6 223 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 IGLL5B9A064 214 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 M0R381 172 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 CTRLP40313 264 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 FOXA3P55318 350 aaPredicted RBP7.9□□□□□ -1.14
SSBP1-202ENST00000461433 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 UFSP1Q6NVU6 142 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 ZFP82Q8N141 532 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 OR4C5Q8NGB2 326 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 OR10G8Q8NGN5 311 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 SAMD10Q9BYL1 202 aa7.9□□□□□ -1.14
SSBP1-202ENST00000461433 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
SSBP1-202ENST00000461433 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 A0A1W2PPQ1 181 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 F8W036 122 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 PNRC1Q12796 327 aaPredicted RBP7.89□□□□□ -1.15
SSBP1-202ENST00000461433 TMEM88Q6PEY1 159 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 C15orf54Q8N8G6 183 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 TSKUQ8WUA8 353 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 TPPP3Q9BW30 176 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 CNFNQ9BYD5 112 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 A8MWV9 139 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 F2Z2F3 143 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 CRYGDP07320 174 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 SSTP61278 116 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 FAM210BQ96KR6 192 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
SSBP1-202ENST00000461433 TRAV26-1A0A087WT03 109 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 CRYBA4P53673 196 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 Q6ZSN1 163 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
SSBP1-202ENST00000461433 A0A087WWL8 130 aa7.87□□□□□ -1.15
SSBP1-202ENST00000461433 TRGV4A0A0C4DH28 118 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms