RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 PEMTQ9UBM1 199 aa15.07■□□□□ 0
CCM2-203ENST00000461377 IGLV2-18A0A075B6J9 118 aa15.06■□□□□ 0
CCM2-203ENST00000461377 DUSP14O95147 198 aaKnown RBP15.06■□□□□ 0
CCM2-203ENST00000461377 FOXI2Q6ZQN5 318 aa15.06■□□□□ 0
CCM2-203ENST00000461377 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
CCM2-203ENST00000461377 MCRIP2Q9BUT9 160 aaKnown RBP15.06■□□□□ 0
CCM2-203ENST00000461377 TRAV12-3A0A0B4J271 114 aa15.05■□□□□ 0
CCM2-203ENST00000461377 H0Y8G0 127 aa15.05■□□□□ 0
CCM2-203ENST00000461377 DUX3Q96PT4 197 aa15.05■□□□□ 0
CCM2-203ENST00000461377 DPH3P1Q9H4G8 78 aa15.05■□□□□ 0
CCM2-203ENST00000461377 TRAV2A0A0B4J234 112 aa15.04■□□□□ -0
CCM2-203ENST00000461377 IGKV3-20P01619 116 aa15.04■□□□□ -0
CCM2-203ENST00000461377 DLX4Q92988 240 aaPredicted RBP15.04■□□□□ -0
CCM2-203ENST00000461377 FCER1GP30273 86 aa15.04■□□□□ -0
CCM2-203ENST00000461377 TSPOP30536 169 aa15.04■□□□□ -0
CCM2-203ENST00000461377 ST20Q9HBF5 79 aa15.04■□□□□ -0
CCM2-203ENST00000461377 hDV102S1A0JD36 115 aa15.03■□□□□ -0
CCM2-203ENST00000461377 CDKN1BP46527 198 aa15.03■□□□□ -0
CCM2-203ENST00000461377 AMTNQ6UX39 209 aa15.03■□□□□ -0
CCM2-203ENST00000461377 FLNAP21333 2647 aaKnown RBP15.02■□□□□ -0
CCM2-203ENST00000461377 Q6ZN92 141 aa15.02■□□□□ -0
CCM2-203ENST00000461377 C14orf178Q8N769 122 aaPredicted RBP15.02■□□□□ -0
CCM2-203ENST00000461377 AP1S3Q96PC3 154 aa15.02■□□□□ -0
CCM2-203ENST00000461377 TRAV12-2A0A075B6T6 113 aa15.02□□□□□ -0.01
CCM2-203ENST00000461377 HIST2H2BDQ6DRA6 164 aa15.02□□□□□ -0.01
CCM2-203ENST00000461377 IFI27L1Q96BM0 104 aa15.02□□□□□ -0.01
CCM2-203ENST00000461377 PMCHL2Q9BQD1 86 aa15.02□□□□□ -0.01
CCM2-203ENST00000461377 CD7P09564 240 aa15.01□□□□□ -0.01
CCM2-203ENST00000461377 SPINK13Q1W4C9 94 aa15.01□□□□□ -0.01
CCM2-203ENST00000461377 LGALS9BQ3B8N2 356 aa15.01□□□□□ -0.01
CCM2-203ENST00000461377 LGALS9CQ6DKI2 356 aa15.01□□□□□ -0.01
CCM2-203ENST00000461377 CCDC168Q8NDH2 2452 aa15.01□□□□□ -0.01
CCM2-203ENST00000461377 HNRNPA3P51991 378 aaKnown RBP15□□□□□ -0.01
CCM2-203ENST00000461377 TMEM61Q8N0U2 210 aa15□□□□□ -0.01
CCM2-203ENST00000461377 POM121L12Q8N7R1 296 aa15□□□□□ -0.01
CCM2-203ENST00000461377 TLN2Q9Y4G6 2542 aa15□□□□□ -0.01
CCM2-203ENST00000461377 A0A1B0GV90 55 aa15□□□□□ -0.01
CCM2-203ENST00000461377 HSBP1L1C9JCN9 74 aa15□□□□□ -0.01
CCM2-203ENST00000461377 RNASE1P07998 156 aaKnown RBP15□□□□□ -0.01
CCM2-203ENST00000461377 RASL10AQ92737 203 aa15□□□□□ -0.01
CCM2-203ENST00000461377 IGHV3-16A0A0C4DH30 117 aa14.99□□□□□ -0.01
CCM2-203ENST00000461377 A8MTW9 85 aa14.99□□□□□ -0.01
CCM2-203ENST00000461377 C9orf85Q96MD7 179 aa14.99□□□□□ -0.01
CCM2-203ENST00000461377 KIF25-AS1Q9Y6Z4 181 aa14.99□□□□□ -0.01
CCM2-203ENST00000461377 DEFB131AP59861 70 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 DYNLRB2Q8TF09 96 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 TMEM158Q8WZ71 300 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 RAX2Q96IS3 184 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 IGHV1OR15-1A0A075B7D0 117 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 KNCNA6PVL3 124 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 MGPP08493 103 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 SMIM2Q9BVW6 85 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 C16orf95Q9H693 158 aa14.98□□□□□ -0.01
CCM2-203ENST00000461377 HELZ2Q9BYK8 2649 aaKnown RBP14.98□□□□□ -0.01
CCM2-203ENST00000461377 HLA-DRB4P13762 266 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 FHL3Q13643 280 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 LAGE3Q14657 143 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 DEFB114Q30KQ6 69 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 C20orf78Q9BR46 151 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 GOLT1BQ9Y3E0 138 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 HLA-DRB4X5D2U9 266 aa14.97□□□□□ -0.01
CCM2-203ENST00000461377 CD28P10747 220 aa14.96□□□□□ -0.01
CCM2-203ENST00000461377 LINC00315P59091 139 aa14.96□□□□□ -0.01
CCM2-203ENST00000461377 SCGB2A2Q13296 93 aa14.96□□□□□ -0.01
CCM2-203ENST00000461377 MRPS16Q9Y3D3 137 aaKnown RBP14.96□□□□□ -0.01
CCM2-203ENST00000461377 SONP18583 2426 aaKnown RBP14.96□□□□□ -0.01
CCM2-203ENST00000461377 Q8N1Y9 231 aa14.96□□□□□ -0.01
CCM2-203ENST00000461377 SUMO2P61956 95 aaKnown RBP14.95□□□□□ -0.02
CCM2-203ENST00000461377 RPL39LQ96EH5 51 aaKnown RBP14.95□□□□□ -0.02
CCM2-203ENST00000461377 C18orf15Q96N68 181 aa14.95□□□□□ -0.02
CCM2-203ENST00000461377 MDFICQ9P1T7 246 aa14.95□□□□□ -0.02
CCM2-203ENST00000461377 MYO9AB2RTY4 2548 aa14.95□□□□□ -0.02
CCM2-203ENST00000461377 H3BMM0 161 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 TCAPO15273 167 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 C11orf44Q8N8P7 122 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 LINC01006Q8NI28 216 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 TMEM160Q9NX00 188 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 ANK3Q12955 4377 aaKnown RBP14.94□□□□□ -0.02
CCM2-203ENST00000461377 UNC79Q9P2D8 2635 aa14.94□□□□□ -0.02
CCM2-203ENST00000461377 AKAP9Q99996 3911 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 MUC4Q99102 2169 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 PPP1R17O96001 155 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 SMIM17P0DL12 118 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 CD300EQ496F6 205 aaPredicted RBP14.93□□□□□ -0.02
CCM2-203ENST00000461377 JPT2Q9H910 190 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 MAP6D1Q9H9H5 199 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 A0A1W2PRX2 142 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1BA6NDE4 496 aaKnown RBP14.93□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1EA6NEQ0 496 aaKnown RBP14.93□□□□□ -0.02
CCM2-203ENST00000461377 CCL24O00175 119 aa14.93□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1DP0C7P1 496 aaKnown RBP14.93□□□□□ -0.02
CCM2-203ENST00000461377 NUTF2P61970 127 aaKnown RBP14.93□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1A1P0DJD3 496 aaKnown RBP14.92□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1CP0DJD4 496 aa14.92□□□□□ -0.02
CCM2-203ENST00000461377 RBMY1FQ15415 496 aaKnown RBP14.92□□□□□ -0.02
CCM2-203ENST00000461377 ZNF124Q15973 351 aa14.92□□□□□ -0.02
CCM2-203ENST00000461377 SPAG8Q99932 426 aaPredicted RBP14.92□□□□□ -0.02
CCM2-203ENST00000461377 CITED2Q99967 270 aaPredicted RBP14.92□□□□□ -0.02
CCM2-203ENST00000461377 SLC25A34Q6PIV7 304 aa14.91□□□□□ -0.02
CCM2-203ENST00000461377 SYT8Q8NBV8 401 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms