RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-202ENST00000461127 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 CDKN1BP46527 198 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 HAMPP81172 84 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 ERCC8Q13216 396 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 VGLL1Q99990 258 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 PSG8Q9UQ74 426 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 KLF12Q9Y4X4 402 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 F8W036 122 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 NXPH4O95158 308 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 GNG4P50150 75 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 ZNF138P52744 262 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 Q86TA4 180 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 C20orf144Q9BQM9 153 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
TOP3A-202ENST00000461127 CENPWQ5EE01 88 aa11.73□□□□□ -0.53
TOP3A-202ENST00000461127 Q8TAT8 98 aa11.73□□□□□ -0.53
TOP3A-202ENST00000461127 UBR4Q5T4S7 5183 aa11.73□□□□□ -0.53
TOP3A-202ENST00000461127 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
TOP3A-202ENST00000461127 C9JCJ5 164 aa11.72□□□□□ -0.53
TOP3A-202ENST00000461127 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
TOP3A-202ENST00000461127 PLA2G1BP04054 148 aaKnown RBP11.72□□□□□ -0.53
TOP3A-202ENST00000461127 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
TOP3A-202ENST00000461127 KRBOX1C9JBD0 128 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 LTAP01374 205 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 SAPCD1Q5SSQ6 148 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 VSIG2Q96IQ7 327 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 SEC11CQ9BY50 192 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 ZNF492Q9P255 531 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 ZFP30Q9Y2G7 519 aa11.71□□□□□ -0.53
TOP3A-202ENST00000461127 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
TOP3A-202ENST00000461127 LEPP41159 167 aa11.7□□□□□ -0.54
TOP3A-202ENST00000461127 NHLRC2Q8NBF2 726 aa11.7□□□□□ -0.54
TOP3A-202ENST00000461127 TRBV20OR9-2A0A075B6H5 130 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 TRGV2A0A075B6R0 118 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 IGLV5-52A0A0A0MRZ9 124 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 MGST1P10620 155 aaKnown RBP11.69□□□□□ -0.54
TOP3A-202ENST00000461127 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 ODF3Q96PU9 254 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
TOP3A-202ENST00000461127 PGPEP1LA6NFU8 196 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
TOP3A-202ENST00000461127 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 K7EP13 123 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
TOP3A-202ENST00000461127 ADIRFQ15847 76 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 Q6ZTI0 123 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-202ENST00000461127 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 BIN3Q9NQY0 253 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
TOP3A-202ENST00000461127 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
TOP3A-202ENST00000461127 J3KRW8 73 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 APOC3P02656 99 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 GPX1P07203 203 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 C10orf91Q5T1B1 145 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 PRR27Q6MZM9 219 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 SDF2L1Q9HCN8 221 aa11.66□□□□□ -0.54
TOP3A-202ENST00000461127 M0R036 132 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 PAX4O43316 350 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 ATP6V1G1O75348 118 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 CRISP2P16562 243 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 EVI2AP22794 236 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 RPL23P62829 140 aaKnown RBP11.65□□□□□ -0.54
TOP3A-202ENST00000461127 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-202ENST00000461127 GFI1BQ5VTD9 330 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 FAM19A4Q96LR4 140 aa11.65□□□□□ -0.54
TOP3A-202ENST00000461127 GCGP01275 180 aa11.64□□□□□ -0.55
TOP3A-202ENST00000461127 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
TOP3A-202ENST00000461127 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
TOP3A-202ENST00000461127 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
TOP3A-202ENST00000461127 LINC00467Q9BRT7 94 aa11.64□□□□□ -0.55
TOP3A-202ENST00000461127 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
TOP3A-202ENST00000461127 FAM162BQ5T6X4 162 aa11.63□□□□□ -0.55
TOP3A-202ENST00000461127 COX8CQ7Z4L0 72 aa11.63□□□□□ -0.55
TOP3A-202ENST00000461127 SVBPQ8N300 66 aa11.63□□□□□ -0.55
TOP3A-202ENST00000461127 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms