RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 IBA57Q5T440 356 aaKnown RBP4.02□□□□□ -1.77
PTPN12-209ENST00000460731 FAM162BQ5T6X4 162 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 FAM231DQ6ZW35 169 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 LINC01551Q86U37 167 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 C18orf15Q96N68 181 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 NIPSNAP3BQ9BS92 247 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 SCRT2Q9NQ03 307 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 BIN3Q9NQY0 253 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 RPH3ALQ9UNE2 315 aa4.02□□□□□ -1.77
PTPN12-209ENST00000460731 IGHV3-16A0A0C4DH30 117 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 TMEM218A2RU14 115 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 KRBOX1C9JBD0 128 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 GNG4P50150 75 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 FOXA3P55318 350 aaPredicted RBP4.01□□□□□ -1.77
PTPN12-209ENST00000460731 TMEM241Q24JQ0 296 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 RRN3P1Q2M238 152 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 SOHLH1Q5JUK2 328 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 SUMO4Q6EEV6 95 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 TMEM263Q8WUH6 116 aaKnown RBP4.01□□□□□ -1.77
PTPN12-209ENST00000460731 RASL10AQ92737 203 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 KCNS1Q96KK3 526 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 LINC01587Q99440 93 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 SMIM7Q9BQ49 75 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 NDUFAF3Q9BU61 184 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 RETNQ9HD89 108 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 U3KQK5 164 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 DNAH7Q8WXX0 4024 aa4.01□□□□□ -1.77
PTPN12-209ENST00000460731 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 IGHV4-28A0A0C4DH34 117 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 FAM231BA6NCW3 169 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 ZNF727A8MUV8 499 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 ZNF705GA8MUZ8 300 aaPredicted RBP4□□□□□ -1.77
PTPN12-209ENST00000460731 SH2D1AO60880 128 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 PRM2P04554 102 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 RNASE3P12724 160 aaKnown RBP4□□□□□ -1.77
PTPN12-209ENST00000460731 TCL1AP56279 114 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 RPL23P62829 140 aaKnown RBP4□□□□□ -1.77
PTPN12-209ENST00000460731 LGALS9BQ3B8N2 356 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 WDR73Q6P4I2 378 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 C16orf74Q96GX8 76 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 C9orf85Q96MD7 179 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 SPXQ9BT56 116 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 SEC11CQ9BY50 192 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 OSTCQ9NRP0 149 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 IL36BQ9NZH7 164 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 NAT8Q9UHE5 227 aa4□□□□□ -1.77
PTPN12-209ENST00000460731 CARHSP1Q9Y2V2 147 aaKnown RBP4□□□□□ -1.77
PTPN12-209ENST00000460731 TEX48A0A1B0GUV7 120 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 PGPEP1LA6NFU8 196 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 LYRM9A8MSI8 78 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 GNRH2O43555 120 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 SNAI2O43623 268 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 SPINK4O60575 86 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 NXPH4O95158 308 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 TYMSP04818 313 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 OR5AL1P0C617 328 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 SFTA3P0C7M3 94 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 IGLC6P0CF74 106 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 ADCYAP1P18509 176 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 PNRC1Q12796 327 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-209ENST00000460731 OR5I1Q13606 314 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 COMMD7Q86VX2 200 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 NHLRC2Q8NBF2 726 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 ISOC2Q96AB3 205 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 TMEM208Q9BTX3 173 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 CNFNQ9BYD5 112 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 TIMM8BQ9Y5J9 83 aaPredicted RBP3.99□□□□□ -1.77
PTPN12-209ENST00000460731 CSMD3Q7Z407 3707 aa3.99□□□□□ -1.77
PTPN12-209ENST00000460731 NACAE9PAV3 2078 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 A0A0J9YWU9 116 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 CBY3A6NI87 242 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 B4DEV8 164 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 J3KRW8 73 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 SPART-AS1P0CW21 52 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 RPS20P60866 119 aaKnown RBP3.98□□□□□ -1.77
PTPN12-209ENST00000460731 NDUFA5Q16718 116 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 GFRA4Q9GZZ7 299 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 GSN-AS1Q9NRJ2 163 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 V9GYV3 84 aa3.98□□□□□ -1.77
PTPN12-209ENST00000460731 DYNC2H1Q8NCM8 4307 aaKnown RBP3.97□□□□□ -1.77
PTPN12-209ENST00000460731 IGHV3OR16-12A0A075B7B8 117 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 A0A1W2PPQ1 181 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 F2Z2F3 143 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 M0R2P5 195 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 CIDEAO60543 219 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 P01737 135 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 ORM1P02763 201 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 CTRLP40313 264 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 ZNF415Q09FC8 603 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 FAM222AQ5U5X8 452 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
PTPN12-209ENST00000460731 POM121L12Q8N7R1 296 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms