RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 IFNA7P01567 189 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 ERVFC1-1P60608 527 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 FMC1Q96HJ9 113 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 CYTL1Q9NRR1 136 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 MSRB1Q9NZV6 116 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 C11orf21Q9P2W6 132 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 HSPG2P98160 4391 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 A0A0D9SG52 128 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 ARPC5O15511 151 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 S100A9P06702 114 aaKnown RBP6.8□□□□□ -1.32
HDLBP-228ENST00000459788 SEC11BP0C7V7 166 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
HDLBP-228ENST00000459788 EIF5AP63241 154 aaKnown RBP6.8□□□□□ -1.32
HDLBP-228ENST00000459788 LINC01556Q5JQF7 62 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 Q86TA4 180 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 KCNRGQ8N5I3 272 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 SLC25A29Q8N8R3 303 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 SGK494Q96LW2 274 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
HDLBP-228ENST00000459788 IGKV3D-20A0A0C4DH25 116 aa6.79□□□□□ -1.32
HDLBP-228ENST00000459788 IGHV3-38A0A0C4DH36 116 aa6.79□□□□□ -1.32
HDLBP-228ENST00000459788 RHODO00212 210 aa6.79□□□□□ -1.32
HDLBP-228ENST00000459788 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
HDLBP-228ENST00000459788 ASIPP42127 132 aa6.79□□□□□ -1.32
HDLBP-228ENST00000459788 MBD3L1Q8WWY6 194 aa6.79□□□□□ -1.32
HDLBP-228ENST00000459788 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 CRYGDP07320 174 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 UBE2G1P62253 170 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 LAGE3Q14657 143 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 LGALSLQ3ZCW2 172 aaPredicted RBP6.78□□□□□ -1.32
HDLBP-228ENST00000459788 FAM162BQ5T6X4 162 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 LELP1Q5T871 98 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 WFDC10BQ8IUB3 73 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 SYT8Q8NBV8 401 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
HDLBP-228ENST00000459788 A0A087WWC5 75 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 TRAV34A0A0B4J273 112 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 IBA57-AS1B1ANH7 110 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 B4DEV8 164 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 KRBOX1C9JBD0 128 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 LTAP01374 205 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 CXCL1P09341 107 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 FGF8P55075 233 aaPredicted RBP6.77□□□□□ -1.33
HDLBP-228ENST00000459788 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 UBE2G2P60604 165 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 PARLQ9H300 379 aa6.77□□□□□ -1.33
HDLBP-228ENST00000459788 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.33
HDLBP-228ENST00000459788 A0A087WTM6 91 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 KANTRA0A1W2PQU2 76 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 LINC00694P0DN24 101 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 UFSP1Q6NVU6 142 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 Q8N1X5 172 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 ZC2HC1AQ96GY0 325 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 SCRT2Q9NQ03 307 aa6.76□□□□□ -1.33
HDLBP-228ENST00000459788 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 BCL2L11O43521 198 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 SH2D1AO60880 128 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 AKR1C3P42330 323 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 CRIP1P50238 77 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 OR10J3Q5JRS4 329 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 CST9LP1Q5W188 147 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 OR11H4Q8NGC9 324 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
HDLBP-228ENST00000459788 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
HDLBP-228ENST00000459788 TRAV1-1A0A0B4J248 108 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 TRBV10-1A0A0K0K1A3 114 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 PFDN1O60925 122 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 ARMS2P0C7Q2 107 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 TPT1P13693 172 aaKnown RBP6.74□□□□□ -1.33
HDLBP-228ENST00000459788 RAB5CP51148 216 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 TOR2AQ5JU69 321 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 EIF5AL1Q6IS14 154 aaKnown RBP6.74□□□□□ -1.33
HDLBP-228ENST00000459788 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 SFT2D1Q8WV19 159 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 ZNF471Q9BX82 626 aaPredicted RBP6.74□□□□□ -1.33
HDLBP-228ENST00000459788 PHLDA3Q9Y5J5 127 aa6.74□□□□□ -1.33
HDLBP-228ENST00000459788 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 TEX46H3BTG2 121 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 H3BVH4 76 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 PAGE4O60829 102 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 DMRTA1Q5VZB9 504 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 CHCHD7Q9BUK0 85 aa6.73□□□□□ -1.33
HDLBP-228ENST00000459788 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms