RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 TMBIM6P55061 237 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 HIST3H3Q16695 136 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 C20orf197Q8N268 126 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 LSM5Q9Y4Y9 91 aaKnown RBP-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 MPC1Q9Y5U8 109 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 KIAA1107Q9UPP5 1409 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 CSMD1Q96PZ7 3565 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 FRMPD1Q5SYB0 1578 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 CFAP46Q8IYW2 2715 aa-1.95□□□□□ -2.72
SNORD42B-201ENST00000458893 ZMYM4Q5VZL5 1548 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 FAM92AA1XBS5 289 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 K7ERJ3 54 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 PFDN6O15212 129 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 OCMP0CE72 109 aaPredicted RBP-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 KDELR2P33947 212 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 ARPP19P56211 112 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 DEFA3P59666 94 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 ARF6P62330 175 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 POU6F1Q14863 301 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 OR8B8Q15620 311 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 KRTAP20-1Q3LI63 56 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 SDHAF4Q5VUM1 108 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 ALKAL1Q6UXT8 129 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 ST13P4Q8IZP2 240 aaPredicted RBP-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 OR8J2Q8NGG1 315 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 LRRC20Q8TCA0 184 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 PPP1R2P1Q96PQ5 205 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 NINQ8N4C6 2090 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 ATAD2BQ9ULI0 1458 aa-1.96□□□□□ -2.72
SNORD42B-201ENST00000458893 IFT172Q9UG01 1749 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 A0A1B0GW64 132 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 CPSF4LA6NMK7 179 aaKnown RBP-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 CNIH1O95406 144 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 TTRP02766 147 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 CRHP06850 196 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 SERPINA6P08185 405 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 BAGE3Q86Y29 109 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 CLEC2BQ92478 149 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 SLC35B4Q969S0 331 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 MCEEQ96PE7 176 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 CMSS1Q9BQ75 279 aaKnown RBP-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 WFDC6Q9BQY6 131 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 NAA60Q9H7X0 242 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 PKIGQ9Y2B9 76 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 REV3LO60673 3130 aa-1.97□□□□□ -2.72
SNORD42B-201ENST00000458893 ZNF142P52746 1687 aaPredicted RBP-1.97□□□□□ -2.73
SNORD42B-201ENST00000458893 DOCK1Q14185 1865 aa-1.97□□□□□ -2.73
SNORD42B-201ENST00000458893 SMG1Q96Q15 3661 aaKnown RBP-1.97□□□□□ -2.73
SNORD42B-201ENST00000458893 WRNQ14191 1432 aaPredicted RBP eCLIP-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 hADV38S2A0JD32 116 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 CXCL1P09341 107 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 EDDM3BP56851 147 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 FKBP1CQ5VVH2 108 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 OR2T2Q6IF00 324 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 SFXN4Q6P4A7 337 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 GPATCH11Q8N954 259 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 PPDPFLQ8WWR9 84 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 DIRC1Q969H9 104 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 DCUN1D1Q96GG9 259 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 USMG5Q96IX5 58 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 SIGMAR1Q99720 223 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 DRC3Q9H069 523 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 GLTPQ9NZD2 209 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 ITPR2Q14571 2701 aa-1.98□□□□□ -2.73
SNORD42B-201ENST00000458893 F8VZ95 297 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 TFF1P04155 84 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 TPT1P13693 172 aaKnown RBP-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 NFYBP25208 207 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 CARD18P57730 90 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 UBE2D3P61077 147 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 UBE2D2P62837 147 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 MED21Q13503 144 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 AP3S1Q92572 193 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 EVC2Q86UK5 1308 aa-1.99□□□□□ -2.73
SNORD42B-201ENST00000458893 MRC1P22897 1456 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 SSSCA1O60232 199 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 IFNA7P01567 189 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 APOEP02649 317 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 OCM2P0CE71 109 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 ADCYAP1P18509 176 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 RPL35P42766 123 aaKnown RBP-2□□□□□ -2.73
SNORD42B-201ENST00000458893 SPCS3P61009 180 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 MLLT11Q13015 90 aaPredicted RBP-2□□□□□ -2.73
SNORD42B-201ENST00000458893 DEFB110Q30KQ9 67 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 NDUFA11Q86Y39 141 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 SMIM4Q8WVI0 70 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 DCUN1D5Q9BTE7 237 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 LRP5O75197 1615 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 PIK3C2AO00443 1686 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 ABCC11Q96J66 1382 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 LRRC37A2A6NM11 1700 aa-2□□□□□ -2.73
SNORD42B-201ENST00000458893 N4BP2Q86UW6 1770 aaPredicted RBP-2□□□□□ -2.73
SNORD42B-201ENST00000458893 PHIPQ8WWQ0 1821 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 KIF13AQ9H1H9 1805 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 POLA1P09884 1462 aaPredicted RBP-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 FER1L6Q2WGJ9 1857 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 TRANK1O15050 2925 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 TRBV19A0A075B6N1 114 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 FAM236DA0A1B0GTK5 79 aa-2.01□□□□□ -2.73
SNORD42B-201ENST00000458893 CXorf51AA0A1B0GTR3 108 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms