RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ARMS2P0C7Q2 107 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 TDRG1Q3Y452 100 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 GFI1BQ5VTD9 330 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
VPS50-207ENST00000458530 IGHV1OR15-1A0A075B7D0 117 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 TRAV12-3A0A0B4J271 114 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 GRIFINA4D1Z8 144 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 H3BVH4 76 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 M0R2Z0 102 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 PHOX2AO14813 284 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 SNAI2O43623 268 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
VPS50-207ENST00000458530 PRB2P02812 416 aaPredicted RBP6.6□□□□□ -1.35
VPS50-207ENST00000458530 NDUFA6P56556 154 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 TWIST1Q15672 202 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 OR10J3Q5JRS4 329 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 SPANXN1Q5VSR9 72 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 ZNF493Q6ZR52 646 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 C1QTNF4Q9BXJ3 329 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
VPS50-207ENST00000458530 IGHV4-4A0A075B6R2 117 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 ZNF324O75467 553 aaPredicted RBP6.59□□□□□ -1.35
VPS50-207ENST00000458530 CD7P09564 240 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 MUC21Q5SSG8 566 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 MORN3Q6PF18 240 aaPredicted RBP6.59□□□□□ -1.35
VPS50-207ENST00000458530 TRPT1Q86TN4 253 aaKnown RBP6.59□□□□□ -1.35
VPS50-207ENST00000458530 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 TMEM191AQ9H0A3 160 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
VPS50-207ENST00000458530 ZMAT5Q9UDW3 170 aaKnown RBP6.59□□□□□ -1.35
VPS50-207ENST00000458530 TRAV12-2A0A075B6T6 113 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 LOC102724200A0A096LPH7 203 aaPredicted RBP6.58□□□□□ -1.36
VPS50-207ENST00000458530 C5orf52A6NGY3 159 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 UBE2CO00762 179 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 PPBPP02775 128 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 NTF3P20783 257 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 S100A2P29034 98 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 SRIP30626 198 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 SNRPEP62304 92 aaKnown RBP6.58□□□□□ -1.36
VPS50-207ENST00000458530 SLAQ13239 276 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 COA6Q5JTJ3 125 aaKnown RBP6.58□□□□□ -1.36
VPS50-207ENST00000458530 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 BIRC6Q9NR09 4857 aa6.58□□□□□ -1.36
VPS50-207ENST00000458530 LOC105371267A0A1B0GV96 52 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 CBY3A6NI87 242 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 PAX4O43316 350 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 HOXA5P20719 270 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 ZNF415Q09FC8 603 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 Q0VG73 95 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 WFDC9Q8NEX5 89 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 MRAPQ8TCY5 172 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 TMEM208Q9BTX3 173 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 GOLT1BQ9Y3E0 138 aa6.57□□□□□ -1.36
VPS50-207ENST00000458530 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
VPS50-207ENST00000458530 RBMY1BA6NDE4 496 aaKnown RBP6.56□□□□□ -1.36
VPS50-207ENST00000458530 RBMY1EA6NEQ0 496 aaKnown RBP6.56□□□□□ -1.36
VPS50-207ENST00000458530 NXPH4O95158 308 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 RBMY1DP0C7P1 496 aaKnown RBP6.56□□□□□ -1.36
VPS50-207ENST00000458530 FRMD6-AS1P0C7T7 363 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 SMIM17P0DL12 118 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 FXYD7P58549 80 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 KIR3DS1Q14943 382 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 ZNF124Q15973 351 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 ORMDL3Q8N138 153 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 OR10AG1Q8NH19 301 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 DNAH9Q9NYC9 4486 aa6.56□□□□□ -1.36
VPS50-207ENST00000458530 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
VPS50-207ENST00000458530 IGHV3-16A0A0C4DH30 117 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 M0R381 172 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 CRXO43186 299 aaPredicted RBP6.55□□□□□ -1.36
VPS50-207ENST00000458530 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
VPS50-207ENST00000458530 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 Q8N1Y9 231 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 TMEM18Q96B42 140 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 MRAP2Q96G30 205 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 LINC01587Q99440 93 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 ALKBH7Q9BT30 221 aaPredicted RBP6.55□□□□□ -1.36
VPS50-207ENST00000458530 SPXQ9BT56 116 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 NDUFAF3Q9BU61 184 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
VPS50-207ENST00000458530 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
VPS50-207ENST00000458530 MUC21A0A0G2JKD1 596 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 MUC21A0A140T8X8 626 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 GNRH2O43555 120 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 PPP1R17O96001 155 aa6.54□□□□□ -1.36
VPS50-207ENST00000458530 CKS2P33552 79 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms