RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 A0A1B0GV50 99 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 GGTLC3B5MD39 225 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 K7EP13 123 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 PFN1P07737 140 aaKnown RBP10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 FHITP49789 147 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 ZNF80P51504 273 aaPredicted RBP10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 UBE2G2P60604 165 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 TCTE3Q8IZS6 198 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 C10orf126Q8N4M7 172 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
CHCHD3-204ENST00000457942 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 IFNA7P01567 189 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 RHOHQ15669 191 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 CDPF1Q6NVV7 123 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 AKAP14Q86UN6 197 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 FRZBQ92765 325 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
CHCHD3-204ENST00000457942 A0A087WTM6 91 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 PSCAO43653 123 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 S100A4P26447 101 aaKnown RBP10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 FAM213BQ8TBF2 198 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 SUN5Q8TC36 379 aa10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
CHCHD3-204ENST00000457942 TRAV8-6A0A0B4J262 113 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 RS1O15537 224 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 IGLV2-11P01706 119 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 XGP55808 180 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 HAMPP81172 84 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
CHCHD3-204ENST00000457942 TRAV34A0A0B4J273 112 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 CIDEAO60543 219 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 C1QBP02746 253 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 ZNF506Q5JVG8 444 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 C9orf85Q96MD7 179 aa10.64□□□□□ -0.71
CHCHD3-204ENST00000457942 TRBV6-4A0A1B0GX49 114 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 A0A1W2PRE2 83 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 PGPEP1LA6NFU8 196 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 SEC11BP0C7V7 166 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 TPT1P13693 172 aaKnown RBP10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 TIRAPP58753 221 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 Q9HAA7 133 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 ARL2-SNX15V9GYD0 113 aa10.63□□□□□ -0.71
CHCHD3-204ENST00000457942 MGST1P10620 155 aaKnown RBP10.62□□□□□ -0.71
CHCHD3-204ENST00000457942 ASIPP42127 132 aa10.62□□□□□ -0.71
CHCHD3-204ENST00000457942 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
CHCHD3-204ENST00000457942 FAM74A7A6NL05 159 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 PEX7O00628 323 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 EIF5AP63241 154 aaKnown RBP10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 Q86TA4 180 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 BOLA1Q9Y3E2 137 aa10.61□□□□□ -0.71
CHCHD3-204ENST00000457942 J3QL48 77 aa10.6□□□□□ -0.71
CHCHD3-204ENST00000457942 NKX2-5P52952 324 aaPredicted RBP10.6□□□□□ -0.71
CHCHD3-204ENST00000457942 LELP1Q5T871 98 aa10.6□□□□□ -0.71
CHCHD3-204ENST00000457942 STOML3Q8TAV4 291 aa10.6□□□□□ -0.71
CHCHD3-204ENST00000457942 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 FABP5P3A8MUU1 101 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 A8MWV9 139 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 B4DEV8 164 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 KRTAP10-1P60331 282 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 UBE2G1P62253 170 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GAGE1Q13065 139 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GAGE4Q13068 117 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GAGE5Q13069 117 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 CST9LP1Q5W188 147 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 PTH2Q96A98 100 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 PARLQ9H300 379 aa10.59□□□□□ -0.71
CHCHD3-204ENST00000457942 IGLV5-52A0A0A0MRZ9 124 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 UMAD1C9J7I0 102 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 H3BVH4 76 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 M0R036 132 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 PAGE4O60829 102 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 GCSHP23434 173 aa10.58□□□□□ -0.72
CHCHD3-204ENST00000457942 SYT8Q8NBV8 401 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms