RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 TPSG1Q9NRR2 321 aa3.89□□□□□ -1.79
PCDH9-203ENST00000456367 IGKV2D-26A0A0A0MRZ7 120 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 A0A0J9YXV3 536 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TINCRA0A1B0GVN0 87 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 SUMO4Q6EEV6 95 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 LYPD2Q6UXB3 125 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 IGKV1D-37A0A075B6S9 117 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TIMM17BO60830 172 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 PI4KAP42356 2102 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 LINC00322Q6ZN03 302 aaPredicted RBP3.88□□□□□ -1.79
PCDH9-203ENST00000456367 Q6ZPA2 131 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 NPBQ8NG41 125 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 IGLV11-55A0A075B6I3 123 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TRAV4A0A0B4J268 109 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 A0A1W2PRX2 142 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TMEM256-PLSCR3K7ERE1 68 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 UBE2E1P51965 193 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 ATP1A1-AS1Q5TC04 95 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
PCDH9-203ENST00000456367 INTS1Q8N201 2190 aaKnown RBP3.88□□□□□ -1.79
PCDH9-203ENST00000456367 F8WEM9 126 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 WIPF1O43516 503 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 MAPKAPK5-AS1Q8N8E1 139 aa3.88□□□□□ -1.79
PCDH9-203ENST00000456367 KIF26AQ9ULI4 1882 aaPredicted RBP3.88□□□□□ -1.79
PCDH9-203ENST00000456367 TRGV1A0A0A0MS02 117 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 WT1P19544 449 aaPredicted RBP3.87□□□□□ -1.79
PCDH9-203ENST00000456367 BRWD1-AS2P59051 145 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 C3orf56Q8N813 242 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 ZNRD1Q9P1U0 126 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 AHCTF1Q8WYP5 2266 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 NBL1P41271 181 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 FOXE3Q13461 319 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 NRGNQ92686 78 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 SND1-IT1Q9HBX3 110 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 ATP6V0E1O15342 81 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 BUB3O43684 328 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 HIST2H2BCQ6DN03 193 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 HIST2H2BDQ6DRA6 164 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 MRPL55Q7Z7F7 128 aaKnown RBP3.87□□□□□ -1.79
PCDH9-203ENST00000456367 C20orf203Q8NBC4 194 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 CLEC2BQ92478 149 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 KIAA1671Q9BY89 1806 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 A0A0J9YX75 114 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 MRPS12O15235 138 aaKnown RBP3.87□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV3-30-3P0DP02 117 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 PRB4P10163 310 aaPredicted RBP3.87□□□□□ -1.79
PCDH9-203ENST00000456367 LINC01560Q8TB33 94 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 OPRPNQ99935 248 aaPredicted RBP3.87□□□□□ -1.79
PCDH9-203ENST00000456367 ZMAT4Q9H898 229 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 THSD7BQ9C0I4 1608 aa3.87□□□□□ -1.79
PCDH9-203ENST00000456367 EML6Q6ZMW3 1958 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 MED12Q93074 2177 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 IGHV7-4-1A0A0J9YVY3 117 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 EPOPA6NHQ4 379 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 RS1O15537 224 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 IGLV2-23P01705 113 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 UBE2D1P51668 147 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 UBE2D3P61077 147 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 UBE2D2P62837 147 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 HEATR1Q9H583 2144 aaKnown RBP3.86□□□□□ -1.79
PCDH9-203ENST00000456367 DNAJC13O75165 2243 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 LST1O00453 97 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 CGB3P0DN86 165 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 CGB7P0DN87 165 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 THADAQ6YHU6 1953 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 SVILO95425 2214 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 DIDO1Q9BTC0 2240 aaKnown RBP3.86□□□□□ -1.79
PCDH9-203ENST00000456367 VPREB1P12018 145 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
PCDH9-203ENST00000456367 TMEM61Q8N0U2 210 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 Q8N7P7 452 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 URB1-AS1Q96HZ7 61 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 RP1L1Q8IWN7 2480 aaPredicted RBP3.86□□□□□ -1.79
PCDH9-203ENST00000456367 TEX22C9J3V5 150 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 TRIAP1O43715 76 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 LINC00694P0DN24 101 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 INSL3P51460 131 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 C7orf69Q9H7B7 122 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 MYO7BQ6PIF6 2116 aa3.86□□□□□ -1.79
PCDH9-203ENST00000456367 TMEM223A0PJW6 202 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 OVOL3O00110 214 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 CTSGP08311 255 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 PFN2P35080 140 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 DAZ2Q13117 558 aaKnown RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 FAM222AQ5U5X8 452 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 Q6JHZ5 121 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 DAZ4Q86SG3 579 aaKnown RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 CNFNQ9BYD5 112 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 DAZ3Q9NR90 486 aaKnown RBP3.85□□□□□ -1.79
PCDH9-203ENST00000456367 DENND4CQ5VZ89 1909 aa3.85□□□□□ -1.79
PCDH9-203ENST00000456367 BRWD3Q6RI45 1802 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms