RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 F6UB75 175 aa13.34□□□□□ -0.27
PTPN6-204ENST00000456013 H3BUA1 57 aa13.34□□□□□ -0.27
PTPN6-204ENST00000456013 NXPH4O95158 308 aa13.34□□□□□ -0.27
PTPN6-204ENST00000456013 CYSLTR1Q9Y271 337 aa13.34□□□□□ -0.27
PTPN6-204ENST00000456013 MUC4Q99102 2169 aa13.33□□□□□ -0.28
PTPN6-204ENST00000456013 RPL11P62913 178 aaKnown RBP13.32□□□□□ -0.28
PTPN6-204ENST00000456013 HOXA3O43365 443 aaPredicted RBP13.32□□□□□ -0.28
PTPN6-204ENST00000456013 RPL32P62910 135 aaKnown RBP13.32□□□□□ -0.28
PTPN6-204ENST00000456013 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
PTPN6-204ENST00000456013 AMTNQ6UX39 209 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 BRD3OSQ6XYD6 125 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 ASH1LQ9NR48 2969 aaKnown RBP13.31□□□□□ -0.28
PTPN6-204ENST00000456013 SPTBN1Q01082 2364 aaKnown RBP13.31□□□□□ -0.28
PTPN6-204ENST00000456013 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 A0A087WW49 117 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 J3QR89 54 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 IGHG2P01859 326 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 COX6B1P14854 86 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 LINC00315P59091 139 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 GAGE13Q4V321 117 aa13.31□□□□□ -0.28
PTPN6-204ENST00000456013 MORN3Q6PF18 240 aaPredicted RBP13.31□□□□□ -0.28
PTPN6-204ENST00000456013 ZNF815PA8K554 130 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 CRYGDP07320 174 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 PRO0461Q9UI25 63 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 SVEP1Q4LDE5 3571 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 LINC01549A6NIU2 74 aa13.3□□□□□ -0.28
PTPN6-204ENST00000456013 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
PTPN6-204ENST00000456013 ABCA2Q9BZC7 2435 aa13.29□□□□□ -0.28
PTPN6-204ENST00000456013 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
PTPN6-204ENST00000456013 KLLNB2CW77 178 aa13.29□□□□□ -0.28
PTPN6-204ENST00000456013 ETDBQ3ZM63 59 aa13.29□□□□□ -0.28
PTPN6-204ENST00000456013 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
PTPN6-204ENST00000456013 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 A6NJY4 79 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 IGHV4-39P01824 125 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 PAPPA-AS1Q5QFB9 102 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 TSHBP01222 138 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 PF4V1P10720 104 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
PTPN6-204ENST00000456013 LY6EQ16553 131 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 SAMD13Q5VXD3 122 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 SCGB1D4Q6XE38 83 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 PLEKHB2Q96CS7 222 aa13.28□□□□□ -0.28
PTPN6-204ENST00000456013 HIVEP3Q5T1R4 2406 aa13.27□□□□□ -0.28
PTPN6-204ENST00000456013 IGLV4-69A0A075B6H9 119 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 SIGMAR1Q99720 223 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 TP53TG1Q9Y2A0 90 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 TSSC4Q9Y5U2 329 aaPredicted RBP13.27□□□□□ -0.29
PTPN6-204ENST00000456013 ATRXP46100 2492 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 UBE2D1P51668 147 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
PTPN6-204ENST00000456013 SPAG8Q99932 426 aaPredicted RBP13.27□□□□□ -0.29
PTPN6-204ENST00000456013 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
PTPN6-204ENST00000456013 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
PTPN6-204ENST00000456013 A6NDX4 124 aa13.26□□□□□ -0.29
PTPN6-204ENST00000456013 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
PTPN6-204ENST00000456013 FAM159AQ6UWV7 190 aa13.26□□□□□ -0.29
PTPN6-204ENST00000456013 SCGB1A1P11684 91 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 SRSF9Q13242 221 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTPN6-204ENST00000456013 PMVKQ15126 192 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 SUMO4Q6EEV6 95 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 AZU1P20160 251 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 HERVK_113P61574 105 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 KLHL30-AS1Q8NEE0 82 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
PTPN6-204ENST00000456013 MRPL16Q9NX20 251 aaKnown RBP13.25□□□□□ -0.29
PTPN6-204ENST00000456013 H3BUX3 64 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 VCYO14598 125 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 IGLV1-40P01703 118 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 SPATA25Q9BR10 227 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 JPT2Q9H910 190 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 C19orf84I3L1E1 186 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 LCNL1Q6ZST4 164 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 TIMM17AQ99595 171 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 KIR2DL4Q99706 377 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
PTPN6-204ENST00000456013 SRD5A1P18405 259 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 ID1P41134 155 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 BLCAPP62952 87 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 IGF2RP11717 2491 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 IGHV4-61A0A0C4DH41 118 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 K7EMT4 169 aa13.23□□□□□ -0.29
PTPN6-204ENST00000456013 A0A0J9YY99 117 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 Q6ZS46 218 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 DCANP1Q8TF63 244 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 DLX4Q92988 240 aaPredicted RBP13.22□□□□□ -0.29
PTPN6-204ENST00000456013 PIMREGQ9BSJ6 248 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 ZFHX3Q15911 3703 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 CD7P09564 240 aa13.22□□□□□ -0.29
PTPN6-204ENST00000456013 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
PTPN6-204ENST00000456013 AKAP6Q13023 2319 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms