RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 FMC1Q96HJ9 113 aa8.19□□□□□ -1.1
USP40-210ENST00000454354 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
USP40-210ENST00000454354 TRBV6-1A0A0K0K1D8 114 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 SEC11BP0C7V7 166 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 STOML3Q8TAV4 291 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
USP40-210ENST00000454354 TRAV9-2A0A087WT02 112 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 A0A0D9SG52 128 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 BCL2L11O43521 198 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 RHOHQ15669 191 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 DNLZQ5SXM8 178 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 NFE4Q86UQ8 179 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 NHLRC2Q8NBF2 726 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 ZC2HC1AQ96GY0 325 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 PRADC1Q9BSG0 188 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 IL36BQ9NZH7 164 aa8.17□□□□□ -1.1
USP40-210ENST00000454354 LTAP01374 205 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
USP40-210ENST00000454354 EVI2AP22794 236 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
USP40-210ENST00000454354 ASIPP42127 132 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 CRIP1P50238 77 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 UBE2G1P62253 170 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 PARLQ9H300 379 aa8.16□□□□□ -1.1
USP40-210ENST00000454354 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 A8MWV9 139 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 B4DEV8 164 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 KRBOX1C9JBD0 128 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 ZNF674Q2M3X9 581 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 ZNF471Q9BX82 626 aaPredicted RBP8.15□□□□□ -1.1
USP40-210ENST00000454354 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 BOLA1Q9Y3E2 137 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 TNFRSF18Q9Y5U5 241 aa8.15□□□□□ -1.1
USP40-210ENST00000454354 IGHV3-73A0A0B4J1V6 119 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 H3BVH4 76 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 PAGE4O60829 102 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 SH2D1AO60880 128 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 AKR1C3P42330 323 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 LINC01556Q5JQF7 62 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 CST9LP1Q5W188 147 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 FAM213BQ8TBF2 198 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 SFT2D1Q8WV19 159 aa8.14□□□□□ -1.11
USP40-210ENST00000454354 IGHV3-38A0A0C4DH36 116 aa8.13□□□□□ -1.11
USP40-210ENST00000454354 CRYGDP07320 174 aa8.13□□□□□ -1.11
USP40-210ENST00000454354 EIF5AP63241 154 aaKnown RBP8.13□□□□□ -1.11
USP40-210ENST00000454354 SCRT2Q9NQ03 307 aa8.13□□□□□ -1.11
USP40-210ENST00000454354 TRAV8-6A0A0B4J262 113 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 M0R036 132 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 RHODO00212 210 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 EREGO14944 169 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 S100A9P06702 114 aaKnown RBP8.12□□□□□ -1.11
USP40-210ENST00000454354 ARMS2P0C7Q2 107 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 LGALSLQ3ZCW2 172 aaPredicted RBP8.12□□□□□ -1.11
USP40-210ENST00000454354 LELP1Q5T871 98 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 Q6ZSN1 163 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 JPT2Q9H910 190 aa8.12□□□□□ -1.11
USP40-210ENST00000454354 A0A087WTM6 91 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 SCO2A0A1W2PP80 73 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 GRIFINA4D1Z8 144 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 PFDN1O60925 122 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
USP40-210ENST00000454354 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 Q6ZNX1 250 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 TMUB2Q71RG4 321 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
USP40-210ENST00000454354 A0A1B0GV50 99 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 CXCL1P09341 107 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 SFRP2Q96HF1 295 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
USP40-210ENST00000454354 TRAV1-1A0A0B4J248 108 aa8.09□□□□□ -1.11
USP40-210ENST00000454354 TCTE3Q8IZS6 198 aa8.09□□□□□ -1.11
USP40-210ENST00000454354 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
USP40-210ENST00000454354 C14orf178Q8N769 122 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms