RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 C22orf46C9J442 243 aa9.43□□□□□ -0.9
SEC16A-207ENST00000453963 CTSZQ9UBR2 303 aa9.43□□□□□ -0.9
SEC16A-207ENST00000453963 MYO9AB2RTY4 2548 aa9.43□□□□□ -0.9
SEC16A-207ENST00000453963 ABCA2Q9BZC7 2435 aa9.43□□□□□ -0.9
SEC16A-207ENST00000453963 CHD3Q12873 2000 aaKnown RBP9.42□□□□□ -0.9
SEC16A-207ENST00000453963 K7EIM0 57 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 FXYD2P54710 66 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 FOXE3Q13461 319 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 H3BUA1 57 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 TRACP01848 142 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 ACYP1P07311 99 aa9.42□□□□□ -0.9
SEC16A-207ENST00000453963 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
SEC16A-207ENST00000453963 APOC4P55056 127 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 FREM1Q5H8C1 2179 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 IGKV1OR2-108A0A075B7D4 117 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 GRNP28799 593 aaKnown RBP9.41□□□□□ -0.9
SEC16A-207ENST00000453963 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 B5MCH6 92 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 PIEZO2Q9H5I5 2752 aa9.41□□□□□ -0.9
SEC16A-207ENST00000453963 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 C2orf70A6NJV1 201 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 GNRH2O43555 120 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 P0C879 139 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 WFDC2Q14508 124 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 FRMPD3Q5JV73 1810 aa9.4□□□□□ -0.9
SEC16A-207ENST00000453963 COL4A3Q01955 1670 aa9.4□□□□□ -0.91
SEC16A-207ENST00000453963 IGHV3-38A0A0C4DH36 116 aa9.4□□□□□ -0.91
SEC16A-207ENST00000453963 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.91
SEC16A-207ENST00000453963 DYSFO75923 2080 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
SEC16A-207ENST00000453963 DKK4Q9UBT3 224 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 NPBQ8NG41 125 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 NXPH4O95158 308 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 KMT2EQ8IZD2 1858 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 HIVEP3Q5T1R4 2406 aa9.39□□□□□ -0.91
SEC16A-207ENST00000453963 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 G3V4G9 280 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 DENND4AQ7Z401 1863 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 TLN1Q9Y490 2541 aaKnown RBP9.38□□□□□ -0.91
SEC16A-207ENST00000453963 CTRLP40313 264 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 CRYBA4P53673 196 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 RBMY1FQ15415 496 aaKnown RBP9.38□□□□□ -0.91
SEC16A-207ENST00000453963 RMI2Q96E14 147 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
SEC16A-207ENST00000453963 DOPEY1Q5JWR5 2465 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 SORL1Q92673 2214 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 A0A1B0GXF2 115 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 HAMPP81172 84 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
SEC16A-207ENST00000453963 CITED1Q99966 193 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 A4D1N5 150 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 F6UB75 175 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 CTSGP08311 255 aa9.37□□□□□ -0.91
SEC16A-207ENST00000453963 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 FOXI1Q12951 378 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 WI2-2373I1.2A0A1W2PRP0 233 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 E9PLD3 99 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 BUB3O43684 328 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 TTTY13Q9BZ97 58 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 ODF1Q14990 250 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 NCOA6Q14686 2063 aaPredicted RBP9.36□□□□□ -0.91
SEC16A-207ENST00000453963 NAV3Q8IVL0 2385 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 HERV-K104P63124 156 aa9.36□□□□□ -0.91
SEC16A-207ENST00000453963 LINC01620Q4KN68 170 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 SPRY4Q9C004 299 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 Q9H8V8 135 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
SEC16A-207ENST00000453963 ZNF503Q96F45 646 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 IGHV7-81A0A0B4J1V7 117 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 CRLF1O75462 422 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
SEC16A-207ENST00000453963 Q71RC1 249 aaPredicted RBP9.35□□□□□ -0.91
SEC16A-207ENST00000453963 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 CRYGCP07315 174 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 MUSTN1Q8IVN3 82 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 RITA1Q96K30 269 aa9.35□□□□□ -0.91
SEC16A-207ENST00000453963 NACAE9PAV3 2078 aa9.34□□□□□ -0.91
SEC16A-207ENST00000453963 A0A1W2PNU3 283 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-207ENST00000453963 HOXB4P17483 251 aaPredicted RBP9.34□□□□□ -0.91
SEC16A-207ENST00000453963 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
SEC16A-207ENST00000453963 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
SEC16A-207ENST00000453963 CENPVL3A0A0U1RRI6 287 aa9.34□□□□□ -0.91
SEC16A-207ENST00000453963 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
SEC16A-207ENST00000453963 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
SEC16A-207ENST00000453963 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms