RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SLC25A16P16260 332 aa11.92□□□□□ -0.5
TRA2B-205ENST00000453386 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-205ENST00000453386 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 SRSF9Q13242 221 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRA2B-205ENST00000453386 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 OVOL1O14753 267 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
TRA2B-205ENST00000453386 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-205ENST00000453386 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
TRA2B-205ENST00000453386 SPTAN1Q13813 2472 aaKnown RBP11.9□□□□□ -0.5
TRA2B-205ENST00000453386 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 LMO4P61968 165 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 MOB4Q9Y3A3 225 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 NBL1P41271 181 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 EMP1P54849 157 aa11.9□□□□□ -0.5
TRA2B-205ENST00000453386 A0A1B0GWB2 263 aa11.89□□□□□ -0.51
TRA2B-205ENST00000453386 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
TRA2B-205ENST00000453386 KLRB1Q12918 225 aa11.89□□□□□ -0.51
TRA2B-205ENST00000453386 MORN3Q6PF18 240 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-205ENST00000453386 DUSP14O95147 198 aaKnown RBP11.88□□□□□ -0.51
TRA2B-205ENST00000453386 INSL3P51460 131 aa11.88□□□□□ -0.51
TRA2B-205ENST00000453386 BRD3OSQ6XYD6 125 aa11.88□□□□□ -0.51
TRA2B-205ENST00000453386 PLEKHB2Q96CS7 222 aa11.88□□□□□ -0.51
TRA2B-205ENST00000453386 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
TRA2B-205ENST00000453386 LINC01619G3V211 115 aa11.88□□□□□ -0.51
TRA2B-205ENST00000453386 LOC107984156A0A0G2JMH3 177 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 NDUFA4O00483 81 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 RNASE3P12724 160 aaKnown RBP11.87□□□□□ -0.51
TRA2B-205ENST00000453386 SRD5A1P18405 259 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 ARL17AQ8IVW1 177 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 SOCS3O14543 225 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 WFDC12Q8WWY7 111 aa11.87□□□□□ -0.51
TRA2B-205ENST00000453386 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 A6NJY4 79 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 LY6EQ16553 131 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 PPP1R17O96001 155 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 TP53TG1Q9Y2A0 90 aa11.86□□□□□ -0.51
TRA2B-205ENST00000453386 F5H697 171 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 APOMO95445 188 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 JPT2Q9H910 190 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 ATP6V0BQ99437 205 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 C11orf86A6NJI1 115 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 NDUFS8O00217 210 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 CIDEAO60543 219 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 PF4V1P10720 104 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
TRA2B-205ENST00000453386 CRYGDP07320 174 aa11.84□□□□□ -0.51
TRA2B-205ENST00000453386 PSMB2P49721 201 aa11.84□□□□□ -0.51
TRA2B-205ENST00000453386 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
TRA2B-205ENST00000453386 HIVEP3Q5T1R4 2406 aa11.84□□□□□ -0.51
TRA2B-205ENST00000453386 A0A087WWL8 130 aa11.84□□□□□ -0.51
TRA2B-205ENST00000453386 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
TRA2B-205ENST00000453386 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 COX6B1P14854 86 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-205ENST00000453386 TSHBP01222 138 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 HERVK_113P61574 105 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 FAM159AQ6UWV7 190 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
TRA2B-205ENST00000453386 ZFP2Q6ZN57 461 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 ZNF418Q8TF45 676 aaPredicted RBP11.82□□□□□ -0.52
TRA2B-205ENST00000453386 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 TSPAN13O95857 204 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 KIR2DL4Q99706 377 aa11.82□□□□□ -0.52
TRA2B-205ENST00000453386 MUC4Q99102 2169 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 PMVKQ15126 192 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 CD7P09564 240 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 UBE2D1P51668 147 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 LINC00315P59091 139 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 CLEC2AQ6UVW9 174 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
TRA2B-205ENST00000453386 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-205ENST00000453386 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 USMG5Q96IX5 58 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 COL12A1Q99715 3063 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 IGIPA6NJ69 53 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 VCYO14598 125 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
TRA2B-205ENST00000453386 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-205ENST00000453386 FOXI1Q12951 378 aa11.79□□□□□ -0.52
TRA2B-205ENST00000453386 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
TRA2B-205ENST00000453386 A0A087WW49 117 aa11.79□□□□□ -0.52
TRA2B-205ENST00000453386 A0A0J9YY99 117 aa11.79□□□□□ -0.52
TRA2B-205ENST00000453386 SDHAF1A6NFY7 115 aa11.79□□□□□ -0.52
TRA2B-205ENST00000453386 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms