RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
SGCE-208ENST00000450385 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 A8MWV9 139 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
SGCE-208ENST00000450385 RHOHQ15669 191 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 Q6ZRN7 208 aaPredicted RBP10.93□□□□□ -0.66
SGCE-208ENST00000450385 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 KRTAP3-3Q9BYR6 98 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 IL36BQ9NZH7 164 aa10.93□□□□□ -0.66
SGCE-208ENST00000450385 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
SGCE-208ENST00000450385 S100A4P26447 101 aaKnown RBP10.92□□□□□ -0.66
SGCE-208ENST00000450385 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
SGCE-208ENST00000450385 UBE2G2P60604 165 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 LGALSLQ3ZCW2 172 aaPredicted RBP10.91□□□□□ -0.66
SGCE-208ENST00000450385 ZNF506Q5JVG8 444 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 CDPF1Q6NVV7 123 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 SPATA12Q7Z6I5 190 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 MBD3L1Q8WWY6 194 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 LINC00479Q96M42 142 aa10.91□□□□□ -0.66
SGCE-208ENST00000450385 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 TRAV34A0A0B4J273 112 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 ASIPP42127 132 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
SGCE-208ENST00000450385 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 UBE2G1P62253 170 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 FAM162BQ5T6X4 162 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 Q86TA4 180 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 NHLRC2Q8NBF2 726 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 MSRB1Q9NZV6 116 aa10.9□□□□□ -0.66
SGCE-208ENST00000450385 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 KANTRA0A1W2PQU2 76 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 PGPEP1LA6NFU8 196 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 B4DEV8 164 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 SYT8Q8NBV8 401 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
SGCE-208ENST00000450385 RHODO00212 210 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 LTAP01374 205 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 CRYGDP07320 174 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 CST9LP1Q5W188 147 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 GTSF1LQ9H1H1 148 aa10.88□□□□□ -0.67
SGCE-208ENST00000450385 KRBOX1C9JBD0 128 aa10.87□□□□□ -0.67
SGCE-208ENST00000450385 LELP1Q5T871 98 aa10.87□□□□□ -0.67
SGCE-208ENST00000450385 WFDC10BQ8IUB3 73 aa10.87□□□□□ -0.67
SGCE-208ENST00000450385 RYR1P21817 5038 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 BCL2L11O43521 198 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
SGCE-208ENST00000450385 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 SFT2D1Q8WV19 159 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 PARLQ9H300 379 aa10.86□□□□□ -0.67
SGCE-208ENST00000450385 A0A087WWC5 75 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 LOC100131303A0A0U1RQF7 123 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 CRIP1P50238 77 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 RAB5CP51148 216 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 ZNF471Q9BX82 626 aaPredicted RBP10.85□□□□□ -0.67
SGCE-208ENST00000450385 KRTAP17-1Q9BYP8 105 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 SCRT2Q9NQ03 307 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 HSPG2P98160 4391 aa10.85□□□□□ -0.67
SGCE-208ENST00000450385 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 PAGE4O60829 102 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 SH2D1AO60880 128 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 PFDN1O60925 122 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 CXCL1P09341 107 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 ARMS2P0C7Q2 107 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 AKR1C3P42330 323 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 LAGE3Q14657 143 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 UFSP1Q6NVU6 142 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 PCLOQ9Y6V0 5065 aa10.84□□□□□ -0.67
SGCE-208ENST00000450385 TEX46H3BTG2 121 aa10.83□□□□□ -0.68
SGCE-208ENST00000450385 TPT1P13693 172 aaKnown RBP10.83□□□□□ -0.68
SGCE-208ENST00000450385 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
SGCE-208ENST00000450385 A0A087WTM6 91 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 IGHV3-73A0A0B4J1V6 119 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 TRAV1-1A0A0B4J248 108 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 TMUB2Q71RG4 321 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 SFRP2Q96HF1 295 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
SGCE-208ENST00000450385 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
SGCE-208ENST00000450385 H3BVH4 76 aa10.81□□□□□ -0.68
SGCE-208ENST00000450385 MANBALQ9NQG1 85 aa10.81□□□□□ -0.68
SGCE-208ENST00000450385 DNAH5Q8TE73 4624 aa10.81□□□□□ -0.68
SGCE-208ENST00000450385 LINC00694P0DN24 101 aa10.8□□□□□ -0.68
SGCE-208ENST00000450385 TOR2AQ5JU69 321 aa10.8□□□□□ -0.68
SGCE-208ENST00000450385 BAGE2Q86Y30 109 aa10.8□□□□□ -0.68
SGCE-208ENST00000450385 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms