RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 HLA-DRB4P13762 266 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 DEFB131AP59861 70 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 TDRG1Q3Y452 100 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 FA2HQ7L5A8 372 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 OR10AG1Q8NH19 301 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 PRSS3P2Q8NHM4 247 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 PHLDA3Q9Y5J5 127 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 HLA-DRB4X5D2U9 266 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 HIVEP2P31629 2446 aa7.86□□□□□ -1.15
VIPAS39-203ENST00000448935 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 Q6ZWC4 215 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 NDUFA11Q86Y39 141 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 SCRT2Q9NQ03 307 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 ZNF469Q96JG9 3925 aaPredicted RBP7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 TRAV12-3A0A0B4J271 114 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 Q6ZQT7 251 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 FAM19A2Q8N3H0 131 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 OR2K2Q8NGT1 345 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 MAP6D1Q9H9H5 199 aa7.85□□□□□ -1.15
VIPAS39-203ENST00000448935 H3BMM0 161 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 CRLF1O75462 422 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 SPINK13Q1W4C9 94 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 PRR31Q5SQ13 230 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 AMTNQ6UX39 209 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 URB1-AS1Q96HZ7 61 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 MAP1LC3AQ9H492 121 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 ACANP16112 2415 aa7.84□□□□□ -1.15
VIPAS39-203ENST00000448935 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 M0R381 172 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 GNRH2O43555 120 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 CD7P09564 240 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 KRTDAPP60985 99 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 C1orf43Q9BWL3 253 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 DPH3P1Q9H4G8 78 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 GSN-AS1Q9NRJ2 163 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 ZNF256Q9Y2P7 627 aaPredicted RBP7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 TIMM8BQ9Y5J9 83 aaPredicted RBP7.83□□□□□ -1.16
VIPAS39-203ENST00000448935 IGHV1-24A0A0C4DH33 117 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 KNCNA6PVL3 124 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 TSTD3H0UI37 97 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 NXPH4O95158 308 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 EVI2AP22794 236 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 PKIAP61925 76 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 NSUN5P1Q3KNT7 163 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 NXT2Q9NPJ8 142 aaKnown RBP7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
VIPAS39-203ENST00000448935 TRAV12-2A0A075B6T6 113 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 OR11H12B2RN74 326 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 SAP30O75446 220 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 PPP1R17O96001 155 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 NPYP01303 97 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 BTF3P20290 206 aaKnown RBP7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 PRSS47A8MTI9 375 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 TNFRSF6BO95407 300 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 SMIM17P0DL12 118 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 HIST2H2BDQ6DRA6 164 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 FAM110AQ9BQ89 295 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 F8P00451 2351 aa7.81□□□□□ -1.16
VIPAS39-203ENST00000448935 OTOGQ6ZRI0 2925 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 LOC389332A0A1B0GUA5 103 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 SMKR1H3BMG3 65 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 NCR2O95944 276 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 IGLV1-51P01701 117 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 PMCHL1Q16048 86 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 STHQ8IWL8 128 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 TMEM70Q9BUB7 260 aa7.8□□□□□ -1.16
VIPAS39-203ENST00000448935 C20orf202A1L168 122 aa7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 NUTF2P61970 127 aaKnown RBP7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 LINC00467Q9BRT7 94 aa7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
VIPAS39-203ENST00000448935 LINC01546A6NGU7 62 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 CBY3A6NI87 242 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 CRXO43186 299 aaPredicted RBP7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 INSP01308 110 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 HBDP02042 147 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 Q8N8P6 123 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 AGRNO00468 2067 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 AKAP9Q99996 3911 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 K7EMI3 77 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 FXYD7P58549 80 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms