RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 MUC4Q99102 2169 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
SF1-211ENST00000448404 CFHR3Q02985 330 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 JPT2Q9H910 190 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 A0A1B0GW15 77 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 LEPP41159 167 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 GTF2H5Q6ZYL4 71 aa11.16□□□□□ -0.62
SF1-211ENST00000448404 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
SF1-211ENST00000448404 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
SF1-211ENST00000448404 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
SF1-211ENST00000448404 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
SF1-211ENST00000448404 DAZ1Q9NQZ3 744 aaKnown RBP11.15□□□□□ -0.62
SF1-211ENST00000448404 NEGR1Q7Z3B1 354 aa11.15□□□□□ -0.63
SF1-211ENST00000448404 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.63
SF1-211ENST00000448404 USMG5Q96IX5 58 aa11.15□□□□□ -0.63
SF1-211ENST00000448404 PSMB8P28062 276 aa11.14□□□□□ -0.63
SF1-211ENST00000448404 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
SF1-211ENST00000448404 C11orf44Q8N8P7 122 aa11.14□□□□□ -0.63
SF1-211ENST00000448404 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
SF1-211ENST00000448404 PRM2P04554 102 aa11.14□□□□□ -0.63
SF1-211ENST00000448404 S100A4P26447 101 aaKnown RBP11.14□□□□□ -0.63
SF1-211ENST00000448404 Q5PR19 223 aa11.14□□□□□ -0.63
SF1-211ENST00000448404 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
SF1-211ENST00000448404 COX8AP10176 69 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 PET117Q6UWS5 81 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 HBDP02042 147 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 Q96MF0 132 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 CNFNQ9BYD5 112 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
SF1-211ENST00000448404 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 C9orf118A6NHY6 69 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 SAMD13Q5VXD3 122 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 C2CD3Q4AC94 2353 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 IGHV4OR15-8A0A075B7B6 117 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 A0A087WW49 117 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 MGPP08493 103 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
SF1-211ENST00000448404 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 SEC11AP67812 179 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 RPL24P83731 157 aaKnown RBP11.11□□□□□ -0.63
SF1-211ENST00000448404 K7EP34 96 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 SLC25A16P16260 332 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 PCP2Q8IVA1 136 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
SF1-211ENST00000448404 NRACQ8N912 160 aa11.1□□□□□ -0.63
SF1-211ENST00000448404 HTN1P15515 57 aa11.1□□□□□ -0.63
SF1-211ENST00000448404 A0A087WWL8 130 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 H3BRM9 83 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 NMUP48645 174 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 SLURP1P55000 103 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 SMAGPQ0VAQ4 97 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 PRSS1P07477 247 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
SF1-211ENST00000448404 WFDC11Q8NEX6 87 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
SF1-211ENST00000448404 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
SF1-211ENST00000448404 A6NDN8 102 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 K7EMI3 77 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
SF1-211ENST00000448404 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
SF1-211ENST00000448404 TRAV21A0A0B4J279 112 aa11.07□□□□□ -0.64
SF1-211ENST00000448404 AZU1P20160 251 aa11.07□□□□□ -0.64
SF1-211ENST00000448404 HOXD3P31249 432 aaPredicted RBP11.07□□□□□ -0.64
SF1-211ENST00000448404 FOXC2Q99958 501 aa11.07□□□□□ -0.64
SF1-211ENST00000448404 OVOL1O14753 267 aa11.07□□□□□ -0.64
SF1-211ENST00000448404 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 H3BUA1 57 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 FGF6P10767 208 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
SF1-211ENST00000448404 PDZD2O15018 2839 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 NACAE9PAV3 2078 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 ASIPP42127 132 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 DSCR9P59020 149 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 MDFICQ9P1T7 246 aa11.06□□□□□ -0.64
SF1-211ENST00000448404 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 CD7P09564 240 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 RASL10AQ92737 203 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
SF1-211ENST00000448404 SETXQ7Z333 2677 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms