RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SCRT2Q9NQ03 307 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 IGKV1OR2-108A0A075B7D4 117 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SIVA1O15304 175 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 GYPEP15421 78 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 LRP4O75096 1905 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SIRPDQ9H106 197 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 A0A087X0K7 114 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 ZNF581Q9P0T4 197 aa6.67□□□□□ -1.34
PTPN3-204ENST00000446349 A6NDX4 124 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 HILS1P60008 231 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 ZNF124Q15973 351 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 ZC2HC1AQ96GY0 325 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 NDUFS7O75251 213 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 PFN2P35080 140 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 Q8NA96 180 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 CFHR4Q92496 578 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 TRBV7-3A0A075B6L6 115 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 LGALS9O00182 355 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 IGKV1-39P01597 117 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 IGKV1D-39P04432 117 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
PTPN3-204ENST00000446349 HHLA3Q9XRX5 114 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 IGLV1-47P01700 117 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 TMEM213A2RRL7 107 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 K7EIM0 57 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 TIRAPP58753 221 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 NPC2P61916 151 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 KIR2DL5BQ8NHK3 375 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 TRBV6-1A0A0K0K1D8 114 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 DNAJC9-AS1A6NH13 148 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 LYRM9A8MSI8 78 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 V9GYV3 84 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 ALPK3Q96L96 1907 aa6.66□□□□□ -1.34
PTPN3-204ENST00000446349 SPRY2O43597 315 aa6.65□□□□□ -1.34
PTPN3-204ENST00000446349 CAMK2N2Q96S95 79 aa6.65□□□□□ -1.34
PTPN3-204ENST00000446349 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
PTPN3-204ENST00000446349 LINC00479Q96M42 142 aa6.65□□□□□ -1.34
PTPN3-204ENST00000446349 TRAV8-3A0A0A6YYJ7 113 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 F8W735 103 aaPredicted RBP6.65□□□□□ -1.35
PTPN3-204ENST00000446349 AGPAT4-IT1Q9H0P7 198 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 SELENOKQ9Y6D0 94 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 IGHV4OR15-8A0A075B7B6 117 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 A0A087WW49 117 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 WI2-2373I1.2A0A1W2PRP0 233 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 NDUFA1O15239 70 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 IGHG4P01861 327 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 SUMO4Q6EEV6 95 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 WNK1Q9H4A3 2382 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 SPATA25Q9BR10 227 aa6.65□□□□□ -1.35
PTPN3-204ENST00000446349 HLA-DMBP28068 263 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 Q6YL49 198 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 LINC00574Q9H8X3 128 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 DYNAPQ8N1N2 210 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 PRO1854Q9UHT4 67 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 PCNX3Q9H6A9 2034 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 H0YGX0 51 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 J3QQQ9 107 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 BLCAPP62952 87 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 PRO0255Q9UI72 69 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 CTSGP08311 255 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 ATRAIDQ6UW56 229 aa6.64□□□□□ -1.35
PTPN3-204ENST00000446349 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 COL5A1P20908 1838 aaPredicted RBP6.63□□□□□ -1.35
PTPN3-204ENST00000446349 BDP1A6H8Y1 2624 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 H7C423 109 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 IGHV4-31P0DP07 118 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 NFE4Q86UQ8 179 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 DIAPH2-AS1Q14236 149 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 NAV3Q8IVL0 2385 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 NDUFB1O75438 58 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 XCL1P47992 114 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 DEFB136Q30KP8 78 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 IGF1P05019 195 aa6.63□□□□□ -1.35
PTPN3-204ENST00000446349 LINC01548A6NM66 108 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 C11orf45Q8TAV5 145 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 Q9HAA7 133 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 CITED2Q99967 270 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-204ENST00000446349 A0A0J9YY99 117 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 GAGE2AQ6NT46 116 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
PTPN3-204ENST00000446349 IGHV3-38A0A0C4DH36 116 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 C9JAW5 83 aa6.62□□□□□ -1.35
PTPN3-204ENST00000446349 PRR14LQ5THK1 2151 aa6.61□□□□□ -1.35
PTPN3-204ENST00000446349 ADAMTSL5Q6ZMM2 481 aa6.61□□□□□ -1.35
PTPN3-204ENST00000446349 COX8AP10176 69 aa6.61□□□□□ -1.35
PTPN3-204ENST00000446349 EGR2P11161 476 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-204ENST00000446349 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
PTPN3-204ENST00000446349 IGKV1-17P01599 117 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms