RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RPL39LQ96EH5 51 aaKnown RBP6.18□□□□□ -1.42
SMG1-202ENST00000446231 EIF4EBP1Q13541 118 aaPredicted RBP6.18□□□□□ -1.42
SMG1-202ENST00000446231 SDHAF1A6NFY7 115 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 NDPQ00604 133 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 FLNBO75369 2602 aaKnown RBP6.18□□□□□ -1.42
SMG1-202ENST00000446231 NDUFC2O95298 119 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 TPSG1Q9NRR2 321 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 HECTD1Q9ULT8 2610 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 M0QXV9 152 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 RS1O15537 224 aa6.18□□□□□ -1.42
SMG1-202ENST00000446231 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 IGKV1OR2-108A0A075B7D4 117 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 RHODO00212 210 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 RBMY1FQ15415 496 aaKnown RBP6.17□□□□□ -1.42
SMG1-202ENST00000446231 DUX4L9Q6RFH8 374 aaPredicted RBP6.17□□□□□ -1.42
SMG1-202ENST00000446231 RNF138Q8WVD3 245 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 IGHV3OR16-12A0A075B7B8 117 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 C8orf31Q8N9H6 132 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 RITA1Q96K30 269 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
SMG1-202ENST00000446231 JPT2Q9H910 190 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 RBAKDNA6NC62 111 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 GATD1Q8NB37 220 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 MDS2Q8NDY4 140 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
SMG1-202ENST00000446231 INS-IGF2F8WCM5 200 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 TINCRA0A1B0GVN0 87 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 K7EIM0 57 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 LY6EQ16553 131 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 DYNAPQ8N1N2 210 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 VWC2LB2RUY7 222 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 CLEC2BQ92478 149 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 M0R1W7 72 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 PRR30Q53SZ7 412 aaPredicted RBP6.16□□□□□ -1.42
SMG1-202ENST00000446231 EXPH5Q8NEV8 1989 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 VMO1Q7Z5L0 202 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 FRMPD3Q5JV73 1810 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 MAP1AP78559 2803 aaPredicted RBP6.16□□□□□ -1.42
SMG1-202ENST00000446231 IGKV1D-37A0A075B6S9 117 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 TEX36Q5VZQ5 186 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 FDCSPQ8NFU4 85 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 CENPFP49454 3210 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 NCKAP5O14513 1909 aa6.16□□□□□ -1.42
SMG1-202ENST00000446231 CCL21O00585 134 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 OOSP1A8MZH6 123 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 RNASE6Q93091 150 aaKnown RBP6.15□□□□□ -1.42
SMG1-202ENST00000446231 MLST8Q9BVC4 326 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 IGLV2-11P01706 119 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 SRSF2Q01130 221 aaKnown RBP6.15□□□□□ -1.42
SMG1-202ENST00000446231 TMEM131Q92545 1883 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 USMG5Q96IX5 58 aa6.15□□□□□ -1.42
SMG1-202ENST00000446231 KIF26AQ9ULI4 1882 aaPredicted RBP6.15□□□□□ -1.42
SMG1-202ENST00000446231 FOXE3Q13461 319 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 LINC00527Q9UJ94 153 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.43
SMG1-202ENST00000446231 C9orf139Q6ZV77 190 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 NUP210Q8TEM1 1887 aaPredicted RBP6.15□□□□□ -1.43
SMG1-202ENST00000446231 PEMTQ9UBM1 199 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 SPRY2O43597 315 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 PHLDA1Q8WV24 401 aaPredicted RBP6.15□□□□□ -1.43
SMG1-202ENST00000446231 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 H3BT86 120 aa6.15□□□□□ -1.43
SMG1-202ENST00000446231 GHRHP01286 108 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 MINOS1Q5TGZ0 78 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 MINOS1-NBL1R4GNA1 71 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 BAALCQ8WXS3 180 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 GATA3P23771 443 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 BPTFQ12830 3046 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 I3L2K1 104 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 UQCRQO14949 82 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 CRYGCP07315 174 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 LHBP01229 141 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 Q71RC1 249 aaPredicted RBP6.14□□□□□ -1.43
SMG1-202ENST00000446231 MRPL36Q9P0J6 103 aaKnown RBP6.14□□□□□ -1.43
SMG1-202ENST00000446231 DSCAMO60469 2012 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 KIAA1671Q9BY89 1806 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 C11orf86A6NJI1 115 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 IGLV2-23P01705 113 aa6.14□□□□□ -1.43
SMG1-202ENST00000446231 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 LYPD2Q6UXB3 125 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 GNRH2O43555 120 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 RNF185Q96GF1 192 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 THSD7AQ9UPZ6 1657 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 P0DMU3 169 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 MYCNOSP40205 109 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 ZNF491Q8N8L2 437 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 BAHCC1Q9P281 2608 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 THBDP07204 575 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 WI2-2373I1.2A0A1W2PRP0 233 aa6.13□□□□□ -1.43
SMG1-202ENST00000446231 DAZAP2Q15038 168 aaPredicted RBP6.13□□□□□ -1.43
SMG1-202ENST00000446231 PTPRBP23467 1997 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms