RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CACYBPQ9HB71 228 aaKnown RBP2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 TAS2R4Q9NYW5 299 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 DLG5Q8TDM6 1919 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 NUP210Q8TEM1 1887 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 PATJQ8NI35 1801 aa2.21□□□□□ -2.05
HMGB1P48-201ENST00000446155 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 IGHV1-58A0A0C4DH39 117 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 A0A0G2JQZ4 141 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF705FA8MVS1 300 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 A8MWV9 139 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 IBA57-AS1B1ANH7 110 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 TNFSF15O95150 251 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 CMPK1P30085 196 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 SRP9P49458 86 aaKnown RBP2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 HES1Q14469 280 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 ESRGQ1W209 222 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 CCDC58Q4VC31 144 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF826PQ6ZT77 177 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR5D16Q8NGK9 328 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF418Q8TF45 676 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 SCN8AQ9UQD0 1980 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 MXRA5Q9NR99 2828 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 SPAG17Q6Q759 2223 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 MYH13Q9UKX3 1938 aa2.21□□□□□ -2.06
HMGB1P48-201ENST00000446155 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 C9JAW5 83 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 RER1O15258 196 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 IFNA4P05014 189 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 SCTP09683 121 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF705BP0CI00 300 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 SDC4P31431 198 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 VMA21Q3ZAQ7 101 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 SPANXN5Q5MJ07 72 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 PATE2Q6UY27 113 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 LINC00305Q7Z4B0 112 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 LINC00471Q8N535 108 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 C9orf163Q8N9P6 203 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 LINC00467Q9BRT7 94 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 TIMM21Q9BVV7 248 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 HSPB8Q9UJY1 196 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 HIGD1AQ9Y241 93 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 LHFPL6Q9Y693 200 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 ACANP16112 2415 aa2.2□□□□□ -2.06
HMGB1P48-201ENST00000446155 KNL1Q8NG31 2342 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 SDK2Q58EX2 2172 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRAV3A0A0B4J244 114 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRBV7-6A0A0J9YX20 115 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 LOC107984640A0A0U1RRK4 108 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 CCL16O15467 120 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 P0DMU3 169 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 FAM231AP0DMU4 169 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 FAM231CP0DMU5 169 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 MGST1P10620 155 aaKnown RBP2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 TMEM155Q4W5P6 130 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 MORN2Q502X0 79 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 Q8IYB0 196 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 VPS13CQ709C8 3753 aa2.19□□□□□ -2.06
HMGB1P48-201ENST00000446155 CCDC88CQ9P219 2028 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 MED13LQ71F56 2210 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 MED13Q9UHV7 2174 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRAV1-1A0A0B4J248 108 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 A0A1B0GW64 132 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 DPM2O94777 84 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 C4orf22Q6V702 233 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 TCTE3Q8IZS6 198 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 TEX29Q8N6K0 151 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR8J3Q8NGG0 315 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 SLC50A1Q9BRV3 221 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 CXCL16Q9H2A7 254 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 CBLN4Q9NTU7 201 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 COPZ2Q9P299 210 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 PARP14Q460N5 1801 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 MYH10P35580 1976 aa2.18□□□□□ -2.06
HMGB1P48-201ENST00000446155 CCDC171Q6TFL3 1326 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRAV13-1A0A0B4J241 112 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRGV4A0A0C4DH28 118 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 H3BMG7 143 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 LY6LH3BQJ8 138 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR2H2O95918 312 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 C1QCP02747 245 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 BAALC-AS2P0C853 105 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 UBBP0CG47 229 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 COX4I1P13073 169 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 KLRD1Q13241 179 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF181Q2M3W8 571 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 RNASE10Q5GAN6 216 aaKnown RBP2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 Q5XG85 94 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 TSTD1Q8NFU3 115 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 TSC22D3Q99576 134 aa2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 NSD1Q96L73 2696 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P48-201ENST00000446155 IGKV3D-11A0A0A0MRZ8 115 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 TRBV27A0A0K0K1C4 114 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 NDUFA2O43678 99 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF737O75373 536 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 MT-ND6P03923 174 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms