RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 LOC107984156A0A0G2JMH3 177 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 PRSS29PA6NIE9 313 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
ERCC3-203ENST00000445889 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 ARL17AQ8IVW1 177 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 MRPL16Q9NX20 251 aaKnown RBP10.78□□□□□ -0.68
ERCC3-203ENST00000445889 J3QR89 54 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
ERCC3-203ENST00000445889 SLC25A16P16260 332 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
ERCC3-203ENST00000445889 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
ERCC3-203ENST00000445889 ZNF815PA8K554 130 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.69
ERCC3-203ENST00000445889 APOMO95445 188 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 UBE2E1P51965 193 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-203ENST00000445889 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
ERCC3-203ENST00000445889 A0A087WWL8 130 aa10.76□□□□□ -0.69
ERCC3-203ENST00000445889 TAL2Q16559 108 aa10.76□□□□□ -0.69
ERCC3-203ENST00000445889 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
ERCC3-203ENST00000445889 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
ERCC3-203ENST00000445889 ZNF418Q8TF45 676 aaPredicted RBP10.76□□□□□ -0.69
ERCC3-203ENST00000445889 TOMM6Q96B49 74 aa10.76□□□□□ -0.69
ERCC3-203ENST00000445889 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 OOSP1A8MZH6 123 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 RPL39P62891 51 aaKnown RBP10.75□□□□□ -0.69
ERCC3-203ENST00000445889 ORMDL2Q53FV1 153 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 Q6ZS46 218 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 C1orf122Q6ZSJ8 110 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 C5orf56Q8N8D9 126 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 CIDEAO60543 219 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 IGKV3-20P01619 116 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 PSMB2P49721 201 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 PTH2Q96A98 100 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 MRAP2Q96G30 205 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
ERCC3-203ENST00000445889 NDUFS8O00217 210 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 NPFFO15130 113 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 SPOCK3Q9BQ16 436 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 IGHV4-4A0A075B6R2 117 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 TRAV12-1A0A0B4J245 112 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 RNF223E7ERA6 249 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 ASIPP42127 132 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
ERCC3-203ENST00000445889 F5H697 171 aa10.73□□□□□ -0.69
ERCC3-203ENST00000445889 MUC4Q99102 2169 aa10.73□□□□□ -0.69
ERCC3-203ENST00000445889 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
ERCC3-203ENST00000445889 U3KQE9 123 aa10.73□□□□□ -0.69
ERCC3-203ENST00000445889 LMO4P61968 165 aa10.72□□□□□ -0.69
ERCC3-203ENST00000445889 BLCAPP62952 87 aa10.72□□□□□ -0.69
ERCC3-203ENST00000445889 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
ERCC3-203ENST00000445889 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
ERCC3-203ENST00000445889 RNASE3P12724 160 aaKnown RBP10.72□□□□□ -0.69
ERCC3-203ENST00000445889 OPRPNQ99935 248 aaPredicted RBP10.72□□□□□ -0.69
ERCC3-203ENST00000445889 C11orf86A6NJI1 115 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 CRYGDP07320 174 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 PF4V1P10720 104 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 UTP20O75691 2785 aaKnown RBP10.71□□□□□ -0.69
ERCC3-203ENST00000445889 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-203ENST00000445889 SYT8Q8NBV8 401 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
ERCC3-203ENST00000445889 TSHBP01222 138 aa10.71□□□□□ -0.7
ERCC3-203ENST00000445889 ABCA2Q9BZC7 2435 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
ERCC3-203ENST00000445889 CENPEQ02224 2701 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 TSPAN13O95857 204 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 Q5PR19 223 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 TMEM170BQ5T4T1 132 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 LINC00477Q96M19 166 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 ZNF256Q9Y2P7 627 aaPredicted RBP10.7□□□□□ -0.7
ERCC3-203ENST00000445889 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
ERCC3-203ENST00000445889 ZANQ9Y493 2812 aa10.7□□□□□ -0.7
ERCC3-203ENST00000445889 TRAV12-2A0A075B6T6 113 aa10.69□□□□□ -0.7
ERCC3-203ENST00000445889 FOXI1Q12951 378 aa10.69□□□□□ -0.7
ERCC3-203ENST00000445889 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
ERCC3-203ENST00000445889 LY6DQ14210 128 aa10.69□□□□□ -0.7
ERCC3-203ENST00000445889 DLX4Q92988 240 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-203ENST00000445889 ATP6V0BQ99437 205 aa10.69□□□□□ -0.7
ERCC3-203ENST00000445889 TMEM95Q3KNT9 176 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 H7C2G1 150 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 CD7P09564 240 aa10.68□□□□□ -0.7
ERCC3-203ENST00000445889 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 A6NJY4 79 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms