RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TRGV1A0A0A0MS02 117 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 DEFB130BP0DP73 79 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 DEFB130AP0DP74 79 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
LIME1-202ENST00000444951 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
LIME1-202ENST00000444951 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 GAGE7O76087 117 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 APOC3P02656 99 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 Q6ZTI0 123 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 IL17DQ8TAD2 202 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 C11orf45Q8TAV5 145 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 SPXQ9BT56 116 aa12.27□□□□□ -0.45
LIME1-202ENST00000444951 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 NANOS2P60321 138 aaKnown RBP12.26□□□□□ -0.45
LIME1-202ENST00000444951 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
LIME1-202ENST00000444951 RNF212Q495C1 297 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 CARHSP1Q9Y2V2 147 aaKnown RBP12.26□□□□□ -0.45
LIME1-202ENST00000444951 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 V9GYV3 84 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
LIME1-202ENST00000444951 A8MWL6 223 aa12.25□□□□□ -0.45
LIME1-202ENST00000444951 M0R2P5 195 aa12.25□□□□□ -0.45
LIME1-202ENST00000444951 DAD1P61803 113 aa12.25□□□□□ -0.45
LIME1-202ENST00000444951 DNLZQ5SXM8 178 aa12.25□□□□□ -0.45
LIME1-202ENST00000444951 M0R381 172 aa12.24□□□□□ -0.45
LIME1-202ENST00000444951 SPINK4O60575 86 aa12.24□□□□□ -0.45
LIME1-202ENST00000444951 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
LIME1-202ENST00000444951 CXCL1P09341 107 aa12.24□□□□□ -0.45
LIME1-202ENST00000444951 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
LIME1-202ENST00000444951 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 HTN3P15516 51 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 CT83Q5H943 113 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 OR10AG1Q8NH19 301 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 GTSF1Q8WW33 167 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
LIME1-202ENST00000444951 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 CLRN3Q8NCR9 226 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 DNAH6Q9C0G6 4158 aa12.22□□□□□ -0.45
LIME1-202ENST00000444951 A0A1W2PPQ1 181 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 SNAI2O43623 268 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 Q6ZTC4 211 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 ZFP82Q8N141 532 aa12.21□□□□□ -0.45
LIME1-202ENST00000444951 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
LIME1-202ENST00000444951 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
LIME1-202ENST00000444951 SVBPQ8N300 66 aa12.2□□□□□ -0.46
LIME1-202ENST00000444951 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
LIME1-202ENST00000444951 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
LIME1-202ENST00000444951 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
LIME1-202ENST00000444951 C7orf77A4D0Y5 90 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 F2Z2F3 143 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 RASL10AQ92737 203 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 JPT2Q9H910 190 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 MUC4Q99102 2169 aa12.19□□□□□ -0.46
LIME1-202ENST00000444951 SNAPINO95295 136 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 CTRLP40313 264 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 OR4C5Q8NGB2 326 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 LINC00476Q8WZB0 136 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
LIME1-202ENST00000444951 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 SMIM27A0A1W2PRY6 76 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 CACNG7P62955 275 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 RHEBQ15382 184 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 TWIST1Q15672 202 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 NUP35Q8NFH5 326 aa12.17□□□□□ -0.46
LIME1-202ENST00000444951 A0A087WWL8 130 aa12.16□□□□□ -0.46
LIME1-202ENST00000444951 ATP5G1P05496 136 aa12.16□□□□□ -0.46
LIME1-202ENST00000444951 NTF3P20783 257 aa12.16□□□□□ -0.46
LIME1-202ENST00000444951 FAM3BP58499 235 aaPredicted RBP12.16□□□□□ -0.46
LIME1-202ENST00000444951 PTH2Q96A98 100 aa12.16□□□□□ -0.46
LIME1-202ENST00000444951 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
LIME1-202ENST00000444951 CTDSP1Q9GZU7 261 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms