RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 Q6ZR03 302 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
CDH23-207ENST00000442677 NPBQ8NG41 125 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 LECT2O14960 151 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 TIRAPP58753 221 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 RPL39P62891 51 aaKnown RBP12.3□□□□□ -0.44
CDH23-207ENST00000442677 E9PQ18 207 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 APRG1Q8IVJ8 170 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
CDH23-207ENST00000442677 C15orf65H3BRN8 121 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 IGHV3-30P01768 117 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 IGHV3-33P01772 117 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 IGHV3-30-3P0DP02 117 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 IGHV3-30-5P0DP03 117 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 PCNX2A6NKB5 2137 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 LYPD6Q86Y78 171 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 Q96MF0 132 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
CDH23-207ENST00000442677 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
CDH23-207ENST00000442677 WISP1O95388 367 aa12.28□□□□□ -0.44
CDH23-207ENST00000442677 MLST8Q9BVC4 326 aa12.28□□□□□ -0.44
CDH23-207ENST00000442677 TCF20Q9UGU0 1960 aaKnown RBP12.28□□□□□ -0.44
CDH23-207ENST00000442677 DSCAML1Q8TD84 2053 aa12.28□□□□□ -0.44
CDH23-207ENST00000442677 COX7A2LO14548 114 aa12.28□□□□□ -0.44
CDH23-207ENST00000442677 H0Y9J4 135 aa12.27□□□□□ -0.44
CDH23-207ENST00000442677 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.44
CDH23-207ENST00000442677 LOXP28300 417 aaPredicted RBP12.27□□□□□ -0.44
CDH23-207ENST00000442677 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.44
CDH23-207ENST00000442677 PRR20EP86478 221 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 PRR20CP86479 221 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 PRR20DP86480 221 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 PRR20BP86481 221 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 PRR20AP86496 221 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 C1orf147Q96MC9 270 aaPredicted RBP12.27□□□□□ -0.45
CDH23-207ENST00000442677 GYPEP15421 78 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 DEFB136Q30KP8 78 aa12.27□□□□□ -0.45
CDH23-207ENST00000442677 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
CDH23-207ENST00000442677 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
CDH23-207ENST00000442677 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
CDH23-207ENST00000442677 ZNF503-AS2A6NEH8 195 aa12.26□□□□□ -0.45
CDH23-207ENST00000442677 CSRP1P21291 193 aaKnown RBP12.26□□□□□ -0.45
CDH23-207ENST00000442677 ESM1Q9NQ30 184 aa12.26□□□□□ -0.45
CDH23-207ENST00000442677 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
CDH23-207ENST00000442677 IGLV3-9A0A075B6K5 115 aa12.25□□□□□ -0.45
CDH23-207ENST00000442677 UPK3BQ9BT76 320 aa12.25□□□□□ -0.45
CDH23-207ENST00000442677 K7EQD1 137 aa12.25□□□□□ -0.45
CDH23-207ENST00000442677 IGKV4-1P06312 121 aa12.25□□□□□ -0.45
CDH23-207ENST00000442677 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
CDH23-207ENST00000442677 ABCA4P78363 2273 aa12.24□□□□□ -0.45
CDH23-207ENST00000442677 Q8TCH9 128 aa12.24□□□□□ -0.45
CDH23-207ENST00000442677 GATA3P23771 443 aa12.23□□□□□ -0.45
CDH23-207ENST00000442677 UBE2AP49459 152 aa12.23□□□□□ -0.45
CDH23-207ENST00000442677 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
CDH23-207ENST00000442677 Q6ZUT4 128 aa12.23□□□□□ -0.45
CDH23-207ENST00000442677 MRPL36Q9P0J6 103 aaKnown RBP12.23□□□□□ -0.45
CDH23-207ENST00000442677 SBF1O95248 1867 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 OBSL1O75147 1896 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 Q8NFD4 153 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 MT-ATP8P03928 68 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 CACNA1EQ15878 2313 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
CDH23-207ENST00000442677 LINC00311Q8N616 119 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 DENND4AQ7Z401 1863 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 SHANK1Q9Y566 2161 aa12.22□□□□□ -0.45
CDH23-207ENST00000442677 GTSF1Q8WW33 167 aa12.21□□□□□ -0.45
CDH23-207ENST00000442677 SP5Q6BEB4 398 aaPredicted RBP12.21□□□□□ -0.45
CDH23-207ENST00000442677 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
CDH23-207ENST00000442677 EP300Q09472 2414 aaPredicted RBP12.21□□□□□ -0.46
CDH23-207ENST00000442677 TMEM256-PLSCR3K7ERE1 68 aa12.21□□□□□ -0.46
CDH23-207ENST00000442677 TCL1BO95988 128 aa12.21□□□□□ -0.46
CDH23-207ENST00000442677 SLX1AQ9BQ83 275 aa12.21□□□□□ -0.46
CDH23-207ENST00000442677 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 DAZ2Q13117 558 aaKnown RBP12.2□□□□□ -0.46
CDH23-207ENST00000442677 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
CDH23-207ENST00000442677 C20orf197Q8N268 126 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 ATP6V0E2Q8NHE4 81 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
CDH23-207ENST00000442677 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
CDH23-207ENST00000442677 COA6Q5JTJ3 125 aaKnown RBP12.2□□□□□ -0.46
CDH23-207ENST00000442677 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 V9GYY9 64 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 COL6A6A6NMZ7 2263 aa12.2□□□□□ -0.46
CDH23-207ENST00000442677 E9PLD3 99 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 SLURP1P55000 103 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 RNF152Q8N8N0 203 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 ROS1P08922 2347 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 ATP5G1P05496 136 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 H3BQ85 93 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 DIRC1Q969H9 104 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 MIR7-3HGQ8N6C7 128 aa12.19□□□□□ -0.46
CDH23-207ENST00000442677 USF3Q68DE3 2245 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms