RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
TMEM39B-203ENST00000441402 C9orf85Q96MD7 179 aa12.48□□□□□ -0.41
TMEM39B-203ENST00000441402 TEP1Q99973 2627 aaKnown RBP12.48□□□□□ -0.41
TMEM39B-203ENST00000441402 NUPR1O60356 82 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 RAB4AP20338 218 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 FXYD7P58549 80 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 NUTF2P61970 127 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 MRPL51Q4U2R6 128 aaKnown RBP12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 Q8N1Y9 231 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 HIST1H2BLQ99880 126 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 SERF1AO75920 110 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 PPBPP02775 128 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 AKR1D1P51857 326 aa12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 PACRGQ96M98 296 aaPredicted RBP12.47□□□□□ -0.41
TMEM39B-203ENST00000441402 WIPF1O43516 503 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 PRR31Q5SQ13 230 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 ORMDL3Q8N138 153 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 TMEM18Q96B42 140 aa12.46□□□□□ -0.42
TMEM39B-203ENST00000441402 INSP01308 110 aa12.45□□□□□ -0.42
TMEM39B-203ENST00000441402 EVI2AP22794 236 aa12.45□□□□□ -0.42
TMEM39B-203ENST00000441402 ATRQ13535 2644 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 FABP4P15090 132 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 LAMTOR2Q9Y2Q5 125 aa12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 TIMM8BQ9Y5J9 83 aaPredicted RBP12.44□□□□□ -0.42
TMEM39B-203ENST00000441402 MUC4Q99102 2169 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 D6R8Y8 96 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 M0R381 172 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
TMEM39B-203ENST00000441402 CKS2P33552 79 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 NIT1Q86X76 327 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 PRELID3AQ96N28 172 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 CBY3A6NI87 242 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 POM121L12Q8N7R1 296 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 PTH2Q96A98 100 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 LINC01587Q99440 93 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 DPH3P1Q9H4G8 78 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 XCL2Q9UBD3 114 aa12.42□□□□□ -0.42
TMEM39B-203ENST00000441402 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
TMEM39B-203ENST00000441402 SPRY2O43597 315 aa12.4□□□□□ -0.42
TMEM39B-203ENST00000441402 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
TMEM39B-203ENST00000441402 LINC00614P0C842 121 aa12.4□□□□□ -0.42
TMEM39B-203ENST00000441402 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
TMEM39B-203ENST00000441402 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
TMEM39B-203ENST00000441402 PRSS47A8MTI9 375 aa12.39□□□□□ -0.43
TMEM39B-203ENST00000441402 C12orf54Q6X4T0 127 aa12.39□□□□□ -0.43
TMEM39B-203ENST00000441402 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
TMEM39B-203ENST00000441402 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
TMEM39B-203ENST00000441402 LINC00315P59091 139 aa12.38□□□□□ -0.43
TMEM39B-203ENST00000441402 ZNF415Q09FC8 603 aa12.38□□□□□ -0.43
TMEM39B-203ENST00000441402 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
TMEM39B-203ENST00000441402 C14orf178Q8N769 122 aaPredicted RBP12.38□□□□□ -0.43
TMEM39B-203ENST00000441402 SPXQ9BT56 116 aa12.38□□□□□ -0.43
TMEM39B-203ENST00000441402 HSBP1O75506 76 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 NPYP01303 97 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 SMIM6P0DI80 62 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 PMCHP20382 165 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 C11orf72Q8NBR9 251 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 SAMD10Q9BYL1 202 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 TNFRSF6BO95407 300 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 IGLL1P15814 213 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
TMEM39B-203ENST00000441402 HTN1P15515 57 aa12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 AMTP48728 403 aa12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 PRSS3P2Q8NHM4 247 aa12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 TMEM208Q9BTX3 173 aa12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
TMEM39B-203ENST00000441402 M0R2P5 195 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 NCR2O95944 276 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 ZNF876PQ49A33 203 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 NRACQ8N912 160 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 NDUFAF3Q9BU61 184 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
TMEM39B-203ENST00000441402 LINC01546A6NGU7 62 aa12.34□□□□□ -0.43
TMEM39B-203ENST00000441402 PPP1R17O96001 155 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms