RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 IGHV1OR15-1A0A075B7D0 117 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 F2Z2F3 143 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 PRM2P04554 102 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 OR5AL1P0C617 328 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 RPL35AP18077 110 aaKnown RBP13.98□□□□□ -0.17
SNX17-203ENST00000440760 CMC4P56277 68 aaPredicted RBP13.98□□□□□ -0.17
SNX17-203ENST00000440760 HIST3H2BBQ8N257 126 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 MUC4Q99102 2169 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 HTN1P15515 57 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 Q8N1Y9 231 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 KCNS1Q96KK3 526 aa13.98□□□□□ -0.17
SNX17-203ENST00000440760 SRIP30626 198 aa13.97□□□□□ -0.17
SNX17-203ENST00000440760 TDRG1Q3Y452 100 aa13.97□□□□□ -0.17
SNX17-203ENST00000440760 OR10D4PQ8NGN7 298 aa13.97□□□□□ -0.17
SNX17-203ENST00000440760 CLUHP3Q96NS8 147 aa13.97□□□□□ -0.17
SNX17-203ENST00000440760 MCRIP2Q9BUT9 160 aaKnown RBP13.97□□□□□ -0.17
SNX17-203ENST00000440760 ANK2Q01484 3957 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 A0A1B0GW15 77 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 M0R381 172 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 INSP01308 110 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 SPANXN1Q5VSR9 72 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 GTSCR1Q86UQ5 136 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 GATD1Q8NB37 220 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 MDFICQ9P1T7 246 aa13.96□□□□□ -0.17
SNX17-203ENST00000440760 DEFA6Q01524 100 aa13.96□□□□□ -0.18
SNX17-203ENST00000440760 AMN1Q8IY45 258 aa13.96□□□□□ -0.18
SNX17-203ENST00000440760 IGHV3-16A0A0C4DH30 117 aa13.95□□□□□ -0.18
SNX17-203ENST00000440760 PKD1L1Q8TDX9 2849 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 CBY3A6NI87 242 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 PDZD11Q5EBL8 140 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 ZNF493Q6ZR52 646 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 PHLDA3Q9Y5J5 127 aa13.94□□□□□ -0.18
SNX17-203ENST00000440760 LOC102724200A0A096LPH7 203 aaPredicted RBP13.94□□□□□ -0.18
SNX17-203ENST00000440760 IGHV3OR16-12A0A075B7B8 117 aa13.93□□□□□ -0.18
SNX17-203ENST00000440760 GIG44P09565 113 aaPredicted RBP13.93□□□□□ -0.18
SNX17-203ENST00000440760 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
SNX17-203ENST00000440760 EVI2AP22794 236 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 NUTF2P61970 127 aaKnown RBP13.92□□□□□ -0.18
SNX17-203ENST00000440760 IQCJQ1A5X6 159 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 OXLD1Q5BKU9 147 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 PKIAP61925 76 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 CACNG7P62955 275 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 C1orf158Q8N1D5 194 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 LINC01587Q99440 93 aa13.92□□□□□ -0.18
SNX17-203ENST00000440760 ALKBH7Q9BT30 221 aaPredicted RBP13.92□□□□□ -0.18
SNX17-203ENST00000440760 FAM104BQ5XKR9 115 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 TMEM256Q8N2U0 113 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 TMEM191AQ9H0A3 160 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 IGHV4-4A0A075B6R2 117 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 AMBPP02760 352 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 TMEM208Q9BTX3 173 aa13.91□□□□□ -0.18
SNX17-203ENST00000440760 TRGV11A0A075B6L2 103 aa13.9□□□□□ -0.18
SNX17-203ENST00000440760 SMKR1H3BMG3 65 aa13.9□□□□□ -0.18
SNX17-203ENST00000440760 WIPF1O43516 503 aa13.9□□□□□ -0.18
SNX17-203ENST00000440760 RNF185Q96GF1 192 aa13.9□□□□□ -0.18
SNX17-203ENST00000440760 NCR2O95944 276 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 LINC00310P59036 64 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
SNX17-203ENST00000440760 CDPF1Q6NVV7 123 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 C18orf32Q8TCD1 76 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 D6R8Y8 96 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 NUPR1O60356 82 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 RCHY1Q96PM5 261 aa13.89□□□□□ -0.19
SNX17-203ENST00000440760 TSTD3H0UI37 97 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 NXPH4O95158 308 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 FABP4P15090 132 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 COA6Q5JTJ3 125 aaKnown RBP13.88□□□□□ -0.19
SNX17-203ENST00000440760 C14orf144Q96I85 54 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 PACRGQ96M98 296 aaPredicted RBP13.88□□□□□ -0.19
SNX17-203ENST00000440760 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 JPT2Q9H910 190 aa13.88□□□□□ -0.19
SNX17-203ENST00000440760 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 RAB4AP20338 218 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 BAGE3Q86Y29 109 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 HIST1H2BLQ99880 126 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 SERF1AO75920 110 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 AZU1P20160 251 aa13.87□□□□□ -0.19
SNX17-203ENST00000440760 C14orf178Q8N769 122 aaPredicted RBP13.87□□□□□ -0.19
SNX17-203ENST00000440760 Q0VG73 95 aa13.86□□□□□ -0.19
SNX17-203ENST00000440760 JOSD1Q15040 202 aaPredicted RBP13.86□□□□□ -0.19
SNX17-203ENST00000440760 TRAV26-2A0A0B4J265 109 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 DDTP30046 118 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 OR10J3Q5JRS4 329 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 SMIM15Q7Z3B0 74 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 AP1S3Q96PC3 154 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 MDFIQ99750 246 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 LBHQ53QV2 105 aaPredicted RBP13.85□□□□□ -0.19
SNX17-203ENST00000440760 MORN3Q6PF18 240 aaPredicted RBP13.85□□□□□ -0.19
SNX17-203ENST00000440760 C11orf72Q8NBR9 251 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 CSNK1G2-AS1Q8NCQ2 148 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 LINC00467Q9BRT7 94 aa13.85□□□□□ -0.19
SNX17-203ENST00000440760 GATA1P15976 413 aaPredicted RBP13.84□□□□□ -0.19
SNX17-203ENST00000440760 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
SNX17-203ENST00000440760 ZNF415Q09FC8 603 aa13.84□□□□□ -0.19
SNX17-203ENST00000440760 MGPP08493 103 aa13.83□□□□□ -0.19
SNX17-203ENST00000440760 CKS2P33552 79 aa13.83□□□□□ -0.19
SNX17-203ENST00000440760 U3KQK5 164 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms