RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 FAM240BA0A1B0GVZ2 78 aa9.27□□□□□ -0.93
PTPRN-205ENST00000440552 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.93
PTPRN-205ENST00000440552 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
PTPRN-205ENST00000440552 CCDC32Q9BV29 185 aa9.27□□□□□ -0.93
PTPRN-205ENST00000440552 GAGE12JA6NER3 117 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 A8MWV9 139 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 SIX6O95475 246 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 RNASE3P12724 160 aaKnown RBP9.26□□□□□ -0.93
PTPRN-205ENST00000440552 GNG5P63218 68 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 GAGE1Q13065 139 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 GAGE4Q13068 117 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 GAGE5Q13069 117 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 LRRC37A5PQ49AS3 106 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 GAGE13Q4V321 117 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 CYB561D1Q8N8Q1 229 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 PARLQ9H300 379 aa9.26□□□□□ -0.93
PTPRN-205ENST00000440552 EIF3GO75821 320 aaKnown RBP eCLIP9.25□□□□□ -0.93
PTPRN-205ENST00000440552 GCGP01275 180 aa9.25□□□□□ -0.93
PTPRN-205ENST00000440552 FGF8P55075 233 aaPredicted RBP9.25□□□□□ -0.93
PTPRN-205ENST00000440552 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
PTPRN-205ENST00000440552 HSPB11Q9Y547 144 aa9.25□□□□□ -0.93
PTPRN-205ENST00000440552 A0A1W2PPV4 95 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 MZT2BQ6NZ67 158 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 NIT1Q86X76 327 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 C5orf17Q8NAS9 161 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
PTPRN-205ENST00000440552 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 K7EQM0 130 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 TCRAP04437 139 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 SMUG1Q53HV7 270 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 UFSP1Q6NVU6 142 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 TMEM75Q8N9X5 138 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 URGCP-MRPS24S4R325 110 aa9.23□□□□□ -0.93
PTPRN-205ENST00000440552 ELOBQ15370 118 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 ZFP69Q49AA0 526 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 SUN5Q8TC36 379 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 PPP1R1CQ8WVI7 109 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 SAMD10Q9BYL1 202 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 Q9UF83 564 aa9.22□□□□□ -0.93
PTPRN-205ENST00000440552 RAB2AP61019 212 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 FLI1Q01543 452 aaPredicted RBP9.21□□□□□ -0.94
PTPRN-205ENST00000440552 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
PTPRN-205ENST00000440552 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.94
PTPRN-205ENST00000440552 OR2T35Q8NGX2 323 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 SMIM3Q9BZL3 60 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 KLK12Q9UKR0 248 aa9.21□□□□□ -0.94
PTPRN-205ENST00000440552 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 RHODO00212 210 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 MPC2O95563 127 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 PET100P0DJ07 73 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 ARL14EPLP0DKL9 152 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 RPL12P30050 165 aaKnown RBP9.2□□□□□ -0.94
PTPRN-205ENST00000440552 H2BFSP57053 126 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
PTPRN-205ENST00000440552 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 WFDC1Q9HC57 220 aa9.2□□□□□ -0.94
PTPRN-205ENST00000440552 A0A087WX48 190 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 HMGB3O15347 200 aaKnown RBP9.19□□□□□ -0.94
PTPRN-205ENST00000440552 STAG3L2P0CL84 134 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 STAG3L3P0CL85 134 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 S100A4P26447 101 aaKnown RBP9.19□□□□□ -0.94
PTPRN-205ENST00000440552 Q0VG73 95 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
PTPRN-205ENST00000440552 ASIPP42127 132 aa9.18□□□□□ -0.94
PTPRN-205ENST00000440552 CDC34P49427 236 aaPredicted RBP9.18□□□□□ -0.94
PTPRN-205ENST00000440552 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
PTPRN-205ENST00000440552 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
PTPRN-205ENST00000440552 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
PTPRN-205ENST00000440552 JPT2Q9H910 190 aa9.18□□□□□ -0.94
PTPRN-205ENST00000440552 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 GCHFRP30047 84 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
PTPRN-205ENST00000440552 SUMO1P63165 101 aaKnown RBP9.17□□□□□ -0.94
PTPRN-205ENST00000440552 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 KCNIP4Q6PIL6 250 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 LINC00299Q6ZSB3 139 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 OR2G3Q8NGZ4 309 aa9.17□□□□□ -0.94
PTPRN-205ENST00000440552 TRBV10-1A0A0K0K1A3 114 aa9.16□□□□□ -0.94
PTPRN-205ENST00000440552 RAB24Q969Q5 203 aa9.16□□□□□ -0.94
PTPRN-205ENST00000440552 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
PTPRN-205ENST00000440552 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
PTPRN-205ENST00000440552 INMT-MINDY4F8WBC2 141 aa9.15□□□□□ -0.94
PTPRN-205ENST00000440552 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
PTPRN-205ENST00000440552 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
PTPRN-205ENST00000440552 H3BVH4 76 aa9.14□□□□□ -0.95
PTPRN-205ENST00000440552 UBE2D3P61077 147 aa9.14□□□□□ -0.95
PTPRN-205ENST00000440552 UBE2D2P62837 147 aa9.14□□□□□ -0.95
PTPRN-205ENST00000440552 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms