RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TMEM78Q5T7P6 136 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 ITPR1Q14643 2758 aa7.66□□□□□ -1.18
CDC42SE1-202ENST00000439374 TRAV2A0A0B4J234 112 aa7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 HOXB4P17483 251 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 UCNP55089 124 aa7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 OPRPNQ99935 248 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 HHLA3Q9XRX5 114 aa7.65□□□□□ -1.18
CDC42SE1-202ENST00000439374 ZANQ9Y493 2812 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 LAGE3Q14657 143 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 KHDC1LQ5JSQ8 128 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 C8orf31Q8N9H6 132 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 METTL26Q96S19 204 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.19
CDC42SE1-202ENST00000439374 C9JAW5 83 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 XGP55808 180 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 JPT2Q9H910 190 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 IGLV11-55A0A075B6I3 123 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 INS-IGF2F8WCM5 200 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 RRN3P1Q2M238 152 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 TRPT1Q86TN4 253 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 CFAP46Q8IYW2 2715 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 IGHV3-73A0A0B4J1V6 119 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 LY6LH3BQJ8 138 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 RPS20P60866 119 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 RPL39P62891 51 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 OR11H6Q8NGC7 330 aa7.64□□□□□ -1.19
CDC42SE1-202ENST00000439374 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 TMEM95Q3KNT9 176 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 HIST2H2BDQ6DRA6 164 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 NFE4Q86UQ8 179 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 Q8N9W7 124 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 H3BUX3 64 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 M0R1W7 72 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 NPFFO15130 113 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 TRBV12-3P01733 135 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 C8orf86Q6ZUL3 223 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 HIVEP2P31629 2446 aa7.63□□□□□ -1.19
CDC42SE1-202ENST00000439374 RS1O15537 224 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 BLCAPP62952 87 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 Q6AWC8 147 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 F8W1H4 67 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 GNRH2O43555 120 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 RNF5Q99942 180 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 TMEM14CQ9P0S9 112 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 DOPEY1Q5JWR5 2465 aa7.62□□□□□ -1.19
CDC42SE1-202ENST00000439374 E9PLD3 99 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 ATP5LO75964 103 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 DUSP14O95147 198 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 H7C1H1 209 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 IGHV4-38-2P0DP08 117 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 FOXI1Q12951 378 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 LY6G5BQ8NDX9 201 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 DPF1Q92782 380 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 DLX4Q92988 240 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 CCL19Q99731 98 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 IGHV4-61A0A0C4DH41 118 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 MYMXA0A1B0GTQ4 84 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 SMIM20Q8N5G0 67 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 PRRC2AP48634 2157 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-202ENST00000439374 TRAV41A0A0B4J266 112 aa7.6□□□□□ -1.19
CDC42SE1-202ENST00000439374 SMAD5-AS1Q9Y6J3 95 aa7.6□□□□□ -1.19
CDC42SE1-202ENST00000439374 SRSF1Q07955 248 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■□□□ 11.8
CDC42SE1-202ENST00000439374 FHL3Q13643 280 aa7.6□□□□□ -1.19
CDC42SE1-202ENST00000439374 Q6ZS46 218 aa7.6□□□□□ -1.19
CDC42SE1-202ENST00000439374 PRB1P04280 392 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 LGALS1P09382 135 aaKnown RBP7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 CRIP2P52943 208 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 PAX8Q06710 450 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 NPBQ8NG41 125 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 A0A1B0GW15 77 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 F8W735 103 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 UBE2E1P51965 193 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 TTC32Q5I0X7 151 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 ANKRD29Q8N6D5 301 aa7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 ZNF625Q96I27 306 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-202ENST00000439374 A8MWV9 139 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 TCL1BO95988 128 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 Q8N8P6 123 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 A0A087WX48 190 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 OVOL3O00110 214 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 TSPAN13O95857 204 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 MINOS1Q5TGZ0 78 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 Q6ZUT4 128 aa7.58□□□□□ -1.2
CDC42SE1-202ENST00000439374 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms