RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
HLA-DMB-259ENST00000438510 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
HLA-DMB-259ENST00000438510 NOP10Q9NPE3 64 aaKnown RBP7.56□□□□□ -1.2
HLA-DMB-259ENST00000438510 IL36BQ9NZH7 164 aa7.56□□□□□ -1.2
HLA-DMB-259ENST00000438510 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
HLA-DMB-259ENST00000438510 C7orf77A4D0Y5 90 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 GRIFINA4D1Z8 144 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 H3BVH4 76 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 SPINK4O60575 86 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 CELA1Q9UNI1 258 aa7.55□□□□□ -1.2
HLA-DMB-259ENST00000438510 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 LOC105371267A0A1B0GV96 52 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 A8MWL6 223 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 M0R2P5 195 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 ARMS2P0C7Q2 107 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 DAD1P61803 113 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 NDUFAF3Q9BU61 184 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 MUC4Q99102 2169 aa7.54□□□□□ -1.2
HLA-DMB-259ENST00000438510 SNAI2O43623 268 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 OR5AL1P0C617 328 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 DEFB130BP0DP73 79 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 DEFB130AP0DP74 79 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 RAB5BP61020 215 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 PIK3CD-AS1Q5SR53 167 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 ZFP82Q8N141 532 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 PTH2Q96A98 100 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 WWC2-AS2Q96NR7 200 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 GFRA4Q9GZZ7 299 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 RPS10P5Q9NQ39 176 aa7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 MRPL16Q9NX20 251 aaKnown RBP7.53□□□□□ -1.2
HLA-DMB-259ENST00000438510 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GAGE12BA1L429 117 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 COLCA2A8K830 154 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 F2Z2F3 143 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GAGE7O76087 117 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GAGE12FP0CL80 117 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GAGE12GP0CL81 117 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GAGE12IP0CL82 117 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 GZMBP10144 247 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 C12orf74Q32Q52 190 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 ZNF876PQ49A33 203 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 Q6ZTI0 123 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 ZNF575Q86XF7 245 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 RASL10AQ92737 203 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 TPPP3Q9BW30 176 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 SSBP4Q9BWG4 385 aaPredicted RBP7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 V9GYV3 84 aa7.52□□□□□ -1.21
HLA-DMB-259ENST00000438510 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 C1orf196B1AJZ1 125 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 CTRLP40313 264 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 CACNG7P62955 275 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 SPANXN1Q5VSR9 72 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 CBLN2Q8IUK8 224 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
HLA-DMB-259ENST00000438510 A8MWV9 139 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 M0R381 172 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 NXPH4O95158 308 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 ATP5G1P05496 136 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 TMEM88Q6PEY1 159 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 Q6ZTC4 211 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 OR10AG1Q8NH19 301 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 GTSF1Q8WW33 167 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
HLA-DMB-259ENST00000438510 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 HIGD1CA8MV81 97 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 CIDEAO60543 219 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 RAB5AP20339 215 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 FOXA3P55318 350 aaPredicted RBP7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 WDR73Q6P4I2 378 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 OR4C5Q8NGB2 326 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
HLA-DMB-259ENST00000438510 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
HLA-DMB-259ENST00000438510 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
HLA-DMB-259ENST00000438510 SMIM27A0A1W2PRY6 76 aa7.48□□□□□ -1.21
HLA-DMB-259ENST00000438510 NUPR2A6NF83 97 aa7.48□□□□□ -1.21
HLA-DMB-259ENST00000438510 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms