RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 TP53TG3Q9ULZ0 132 aa9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
HLA-DPA1-243ENST00000437811 LOC102724200A0A096LPH7 203 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 C5orf52A6NGY3 159 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SNRPEP62304 92 aaKnown RBP9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SPANXN1Q5VSR9 72 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 Q8N1Y9 231 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TMEM191AQ9H0A3 160 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
HLA-DPA1-243ENST00000437811 ATRQ13535 2644 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 NXPH4O95158 308 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SRIP30626 198 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 PHLDA3Q9Y5J5 127 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
HLA-DPA1-243ENST00000437811 CBY3A6NI87 242 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 SPRY2O43597 315 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 TMEM256Q8N2U0 113 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 LINC01587Q99440 93 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 MDFICQ9P1T7 246 aa9.9□□□□□ -0.82
HLA-DPA1-243ENST00000437811 M0R381 172 aa9.89□□□□□ -0.83
HLA-DPA1-243ENST00000437811 HOXA5P20719 270 aa9.89□□□□□ -0.83
HLA-DPA1-243ENST00000437811 Q0VG73 95 aa9.89□□□□□ -0.83
HLA-DPA1-243ENST00000437811 AMN1Q8IY45 258 aa9.89□□□□□ -0.83
HLA-DPA1-243ENST00000437811 C1QTNF4Q9BXJ3 329 aa9.89□□□□□ -0.83
HLA-DPA1-243ENST00000437811 UBE2CO00762 179 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 OR10J3Q5JRS4 329 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 EVI2AP22794 236 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 C18orf32Q8TCD1 76 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 GOLT1BQ9Y3E0 138 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 U3KQK5 164 aa9.88□□□□□ -0.83
HLA-DPA1-243ENST00000437811 HTN1P15515 57 aa9.87□□□□□ -0.83
HLA-DPA1-243ENST00000437811 RAB4AP20338 218 aa9.87□□□□□ -0.83
HLA-DPA1-243ENST00000437811 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
HLA-DPA1-243ENST00000437811 FBN1P35555 2871 aaKnown RBP9.87□□□□□ -0.83
HLA-DPA1-243ENST00000437811 PRM2P04554 102 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 SYT8Q8NBV8 401 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 CSNK1G2-AS1Q8NCQ2 148 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
HLA-DPA1-243ENST00000437811 MUC4Q99102 2169 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 IGHV3OR16-12A0A075B7B8 117 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 D6R8Y8 96 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 LINC00310P59036 64 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 EGFEM1PQ0D2K5 195 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
HLA-DPA1-243ENST00000437811 SERF1AO75920 110 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 PPBPP02775 128 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 CKS2P33552 79 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 ZNF705AQ6ZN79 300 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 PTH2Q96A98 100 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 RCHY1Q96PM5 261 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 SPXQ9BT56 116 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
HLA-DPA1-243ENST00000437811 KIR2DL5BA0A0G2JN68 375 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 KIR2DL5BA0A0G2JPC4 375 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 IFITM10A6NMD0 228 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 SMKR1H3BMG3 65 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NCR2O95944 276 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 ESDP10768 282 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 AZU1P20160 251 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 KRTAP10-11P60412 298 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 KIR2DL5AQ8N109 375 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 KIR2DL5BQ8NHK3 375 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 IL17DQ8TAD2 202 aa9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 ZMAT5Q9UDW3 170 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-243ENST00000437811 M0R2P5 195 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NUPR1O60356 82 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 PIK3CD-AS1Q5SR53 167 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 MRAP2Q96G30 205 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 MDFIQ99750 246 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 JPT2Q9H910 190 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NPYP01303 97 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms