RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.59
CD4-202ENST00000437800 CRLF1O75462 422 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
CD4-202ENST00000437800 FXYD2P54710 66 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
CD4-202ENST00000437800 TRBV7-9A0A0J9YWB2 115 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 M0R3E3 92 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 IGHG2P01859 326 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 HILS1P60008 231 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 C18orf15Q96N68 181 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 CDIP1Q9H305 208 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
CD4-202ENST00000437800 IGLL5B9A064 214 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 SRSF2Q01130 221 aaKnown RBP11.32□□□□□ -0.6
CD4-202ENST00000437800 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 ZNF702PQ9H963 129 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 U3KQK5 164 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 IGF1P05019 195 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 CSN3P07498 182 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 NMUP48645 174 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 VCX2Q9H322 139 aa11.32□□□□□ -0.6
CD4-202ENST00000437800 H3BMG7 143 aa11.31□□□□□ -0.6
CD4-202ENST00000437800 FOXI1Q12951 378 aa11.31□□□□□ -0.6
CD4-202ENST00000437800 ANAPC13Q9BS18 74 aa11.31□□□□□ -0.6
CD4-202ENST00000437800 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 APOMO95445 188 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 CACNG7P62955 275 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 Q6ZUT4 128 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 C8orf49Q96NF6 230 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 CHAC1Q9BUX1 264 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 IGHV3-23P01764 117 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 RNASE1P07998 156 aaKnown RBP11.3□□□□□ -0.6
CD4-202ENST00000437800 CTSGP08311 255 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 PRR31Q5SQ13 230 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 CEND1Q8N111 149 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 PRR25Q96S07 402 aa11.3□□□□□ -0.6
CD4-202ENST00000437800 SH2D1AO60880 128 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 INSL3P51460 131 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 HERV-K104P63124 156 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
CD4-202ENST00000437800 A0A096LNJ9 63 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 K7ERJ3 54 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 PPIFP30405 207 aaKnown RBP11.29□□□□□ -0.6
CD4-202ENST00000437800 TAL2Q16559 108 aa11.29□□□□□ -0.6
CD4-202ENST00000437800 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 MT-ATP8P03928 68 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 ATRQ13535 2644 aa11.28□□□□□ -0.6
CD4-202ENST00000437800 C10orf99Q6UWK7 81 aa11.27□□□□□ -0.6
CD4-202ENST00000437800 Q6ZSV7 163 aa11.27□□□□□ -0.6
CD4-202ENST00000437800 BRI3O95415 125 aa11.27□□□□□ -0.61
CD4-202ENST00000437800 ORMDL3Q8N138 153 aa11.27□□□□□ -0.61
CD4-202ENST00000437800 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
CD4-202ENST00000437800 HBDP02042 147 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 CLEC3BP05452 202 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 SPANXA1Q9NS26 97 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 IGHG4P01861 327 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 XGP55808 180 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 CFHR3Q02985 330 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 Q8N2B8 174 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 ASCL2Q99929 193 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
CD4-202ENST00000437800 IGKV2-40A0A087WW87 121 aaPredicted RBP11.25□□□□□ -0.61
CD4-202ENST00000437800 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
CD4-202ENST00000437800 IGKV2D-40P01614 121 aaPredicted RBP11.25□□□□□ -0.61
CD4-202ENST00000437800 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
CD4-202ENST00000437800 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
CD4-202ENST00000437800 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
CD4-202ENST00000437800 B5MCH6 92 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 D6R8Y8 96 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 C12orf74Q32Q52 190 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 IFI27P40305 119 aaPredicted RBP11.24□□□□□ -0.61
CD4-202ENST00000437800 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
CD4-202ENST00000437800 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 ZNF580Q9UK33 172 aa11.24□□□□□ -0.61
CD4-202ENST00000437800 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 H3BUA1 57 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
CD4-202ENST00000437800 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms