RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 ASIPP42127 132 aa11.3□□□□□ -0.6
TMCO3-202ENST00000434316 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
TMCO3-202ENST00000434316 MRPL16Q9NX20 251 aaKnown RBP11.3□□□□□ -0.6
TMCO3-202ENST00000434316 IGHV3OR16-10A0A075B7F0 116 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
TMCO3-202ENST00000434316 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
TMCO3-202ENST00000434316 CIDEAO60543 219 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 COL6A6A6NMZ7 2263 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 MUC4Q99102 2169 aa11.29□□□□□ -0.6
TMCO3-202ENST00000434316 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 ARL3P36405 182 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
TMCO3-202ENST00000434316 CLEC2AQ6UVW9 174 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 CRYGDP07320 174 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 SCGB1A1P11684 91 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 COX6B1P14854 86 aa11.28□□□□□ -0.6
TMCO3-202ENST00000434316 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.6
TMCO3-202ENST00000434316 NDUFS8O00217 210 aa11.27□□□□□ -0.6
TMCO3-202ENST00000434316 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.6
TMCO3-202ENST00000434316 SRSF9Q13242 221 aaKnown RBP eCLIP11.27□□□□□ -0.62e-6■■□□□ 13
TMCO3-202ENST00000434316 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 APOMO95445 188 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
TMCO3-202ENST00000434316 ZFP2Q6ZN57 461 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 SOCS3O14543 225 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 NPFFO15130 113 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 TSHBP01222 138 aa11.27□□□□□ -0.61
TMCO3-202ENST00000434316 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
TMCO3-202ENST00000434316 TSPAN13O95857 204 aa11.26□□□□□ -0.61
TMCO3-202ENST00000434316 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
TMCO3-202ENST00000434316 JPT2Q9H910 190 aa11.26□□□□□ -0.61
TMCO3-202ENST00000434316 PSMB2P49721 201 aa11.26□□□□□ -0.61
TMCO3-202ENST00000434316 UBE2D1P51668 147 aa11.25□□□□□ -0.61
TMCO3-202ENST00000434316 CFAP126Q5VTH2 177 aa11.25□□□□□ -0.61
TMCO3-202ENST00000434316 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
TMCO3-202ENST00000434316 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
TMCO3-202ENST00000434316 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
TMCO3-202ENST00000434316 OVOL1O14753 267 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
TMCO3-202ENST00000434316 NFE4Q86UQ8 179 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
TMCO3-202ENST00000434316 PTH2Q96A98 100 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 TP53TG1Q9Y2A0 90 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 C19orf54Q5BKX5 351 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
TMCO3-202ENST00000434316 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 LMO4P61968 165 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 FOXI1Q12951 378 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
TMCO3-202ENST00000434316 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 A6NJY4 79 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 CD7P09564 240 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 SRD5A1P18405 259 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 LINC00315P59091 139 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 Q6ZS46 218 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 ATP6V0BQ99437 205 aa11.23□□□□□ -0.61
TMCO3-202ENST00000434316 IGF2RP11717 2491 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 SPTAN1Q13813 2472 aaKnown RBP11.22□□□□□ -0.61
TMCO3-202ENST00000434316 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 KIF25-AS1Q9Y6Z4 181 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 A0A0J9YY99 117 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 A0A087WWL8 130 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 TGFAP01135 160 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 FHL3Q13643 280 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
TMCO3-202ENST00000434316 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
TMCO3-202ENST00000434316 EDN2P20800 178 aa11.21□□□□□ -0.61
TMCO3-202ENST00000434316 NDUFA4O00483 81 aa11.21□□□□□ -0.62
TMCO3-202ENST00000434316 MED14OSP0DP75 135 aa11.21□□□□□ -0.62
TMCO3-202ENST00000434316 CDIP1Q9H305 208 aa11.21□□□□□ -0.62
TMCO3-202ENST00000434316 UBE2D3P61077 147 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 UBE2D2P62837 147 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 A0A1B0GV72 72 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
TMCO3-202ENST00000434316 ABCA2Q9BZC7 2435 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
TMCO3-202ENST00000434316 PMVKQ15126 192 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 LY6EQ16553 131 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 F5H697 171 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 TCL1BO95988 128 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 PPP1R17O96001 155 aa11.19□□□□□ -0.62
TMCO3-202ENST00000434316 HERVK_113P61574 105 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms