RNA–Protein interactions for RNA: ENST00000434274.2

LIMS1-209, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 3

Gene LIMS1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-209ENST00000434274 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
LIMS1-209ENST00000434274 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
LIMS1-209ENST00000434274 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
LIMS1-209ENST00000434274 NHLRC2Q8NBF2 726 aa10.18□□□□□ -0.78
LIMS1-209ENST00000434274 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
LIMS1-209ENST00000434274 IL36BQ9NZH7 164 aa10.18□□□□□ -0.78
LIMS1-209ENST00000434274 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 DNAH10OSP0CZ25 163 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 ZNF506Q5JVG8 444 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 DNLZQ5SXM8 178 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
LIMS1-209ENST00000434274 ZNF471Q9BX82 626 aaPredicted RBP10.17□□□□□ -0.78
LIMS1-209ENST00000434274 TRAV34A0A0B4J273 112 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 B4DEV8 164 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 TEX46H3BTG2 121 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 CDK2AP2O75956 126 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
LIMS1-209ENST00000434274 AKR1C3P42330 323 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
LIMS1-209ENST00000434274 LTAP01374 205 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 TPT1P13693 172 aaKnown RBP10.15□□□□□ -0.78
LIMS1-209ENST00000434274 RAB5CP51148 216 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 FAM213BQ8TBF2 198 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 MBD3L1Q8WWY6 194 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.78
LIMS1-209ENST00000434274 OR11H4Q8NGC9 324 aa10.14□□□□□ -0.79
LIMS1-209ENST00000434274 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
LIMS1-209ENST00000434274 IGKV3D-20A0A0C4DH25 116 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 IGHV3-38A0A0C4DH36 116 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 CXCL1P09341 107 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
LIMS1-209ENST00000434274 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 ZC2HC1AQ96GY0 325 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 PARLQ9H300 379 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 PKHD1P08F94 4074 aa10.13□□□□□ -0.79
LIMS1-209ENST00000434274 A0A087WWC5 75 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 PAGE4O60829 102 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 SH2D1AO60880 128 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 CRYGDP07320 174 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 H2AFB1P0C5Y9 115 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 LELP1Q5T871 98 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 WFDC10BQ8IUB3 73 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 PHLDA3Q9Y5J5 127 aa10.12□□□□□ -0.79
LIMS1-209ENST00000434274 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 SMLR1H3BR10 107 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 H3BVH4 76 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 LAGE3Q14657 143 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 ATP6V0E2Q8NHE4 81 aa10.11□□□□□ -0.79
LIMS1-209ENST00000434274 TMUB2Q71RG4 321 aa10.1□□□□□ -0.79
LIMS1-209ENST00000434274 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
LIMS1-209ENST00000434274 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
LIMS1-209ENST00000434274 M0R036 132 aa10.09□□□□□ -0.79
LIMS1-209ENST00000434274 TCTE3Q8IZS6 198 aa10.09□□□□□ -0.79
LIMS1-209ENST00000434274 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 TOR2AQ5JU69 321 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 SCRT2Q9NQ03 307 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 DNAH2Q9P225 4427 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 DNAH17Q9UFH2 4485 aa10.08□□□□□ -0.8
LIMS1-209ENST00000434274 IGHV3-73A0A0B4J1V6 119 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 TRBV10-1A0A0K0K1A3 114 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 PSCAO43653 123 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 IFNA1P01562 189 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 TAGLN2P37802 199 aaKnown RBP10.07□□□□□ -0.8
LIMS1-209ENST00000434274 BAGE2Q86Y30 109 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
LIMS1-209ENST00000434274 SCO2A0A1W2PP80 73 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 IBA57-AS1B1ANH7 110 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 LINC00694P0DN24 101 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 CRIP1P50238 77 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 UFSP1Q6NVU6 142 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
LIMS1-209ENST00000434274 C11orf52Q96A22 123 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 TM2D2Q9BX73 214 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 BIN3Q9NQY0 253 aa10.06□□□□□ -0.8
LIMS1-209ENST00000434274 PDE6DO43924 150 aa10.05□□□□□ -0.8
LIMS1-209ENST00000434274 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
LIMS1-209ENST00000434274 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
LIMS1-209ENST00000434274 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
LIMS1-209ENST00000434274 MLST8Q9BVC4 326 aa10.05□□□□□ -0.8
LIMS1-209ENST00000434274 A0A087WTM6 91 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 M0R381 172 aa10.04□□□□□ -0.8
LIMS1-209ENST00000434274 RPL36AP83881 106 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms