RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CSPG4Q6UVK1 2322 aa5.74□□□□□ -1.49
SYNPO2-203ENST00000434046 TRBV7-3A0A075B6L6 115 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 TRBV7-9A0A0J9YWB2 115 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 TRBV6-1A0A0K0K1D8 114 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 LINC01548A6NM66 108 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 HIVEP3Q5T1R4 2406 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 TEX22C9J3V5 150 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 COX6B1P14854 86 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 KHDC1LQ5JSQ8 128 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 SHISA2Q6UWI4 295 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 GATD1Q8NB37 220 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 NOTCH3Q9UM47 2321 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 ARHGAP32A7KAX9 2087 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 SMCPP49901 116 aaPredicted RBP5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 ATMQ13315 3056 aa5.73□□□□□ -1.49
SYNPO2-203ENST00000434046 IGLC6P0CF74 106 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 FBXL19-AS1Q494R0 122 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 MEIG1Q5JSS6 88 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 TRPT1Q86TN4 253 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 C15orf53Q8NAA6 179 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 PIFOQ8TCI5 191 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 NDUFV3P56181 108 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 SUMO2P61956 95 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 MINOS1Q5TGZ0 78 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 FAM159AQ6UWV7 190 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 C8orf31Q8N9H6 132 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 C16orf92Q96LL3 132 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 MINOS1-NBL1R4GNA1 71 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 OOSP1A8MZH6 123 aa5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 RPL13AP40429 203 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-203ENST00000434046 DMXL2Q8TDJ6 3036 aa5.71□□□□□ -1.49
SYNPO2-203ENST00000434046 TRAV4A0A0B4J268 109 aa5.71□□□□□ -1.49
SYNPO2-203ENST00000434046 HOXB4P17483 251 aaPredicted RBP5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 FHL3Q13643 280 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 ZNF56Q15929 161 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 FAM74A4Q5TZK3 123 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 NDUFA11Q86Y39 141 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 LINC00574Q9H8X3 128 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 NPC2P61916 151 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 METTL26Q96S19 204 aa5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 ZNF256Q9Y2P7 627 aaPredicted RBP5.71□□□□□ -1.5
SYNPO2-203ENST00000434046 DOPEY2Q9Y3R5 2298 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 SAA4P35542 130 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 RPL32P62910 135 aaKnown RBP5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 OXLD1Q5BKU9 147 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 CLEC19AQ6UXS0 136 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 C10orf126Q8N4M7 172 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 EEF1AKMT3Q96AZ1 226 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 LINC00527Q9UJ94 153 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 IGLV1-47P01700 117 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 PAX8Q06710 450 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 BRD3OSQ6XYD6 125 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 TMEM219Q86XT9 240 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 TP53TG1Q9Y2A0 90 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 DUSP14O95147 198 aaKnown RBP5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 NDPQ00604 133 aa5.7□□□□□ -1.5
SYNPO2-203ENST00000434046 MGAQ8IWI9 3026 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 IGKV3D-20A0A0C4DH25 116 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 COX6CP09669 75 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 ASIPP42127 132 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 BAALCQ8WXS3 180 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 C11orf86A6NJI1 115 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 NPFFO15130 113 aa5.69□□□□□ -1.5
SYNPO2-203ENST00000434046 H3BMM0 161 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 OVOL3O00110 214 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 RNASE4P34096 147 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 C15orf32Q32M92 178 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 UBE2WQ96B02 151 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 FCN3O75636 299 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 UBE2E1P51965 193 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 PAPPA-AS1Q5QFB9 102 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 Q6ZQT7 251 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 TMEM190Q8WZ59 177 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 TRAV12-1A0A0B4J245 112 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 CRLF1O75462 422 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 CFC1P0CG37 223 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 CRIP2P52943 208 aaPredicted RBP5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 Q6ZS46 218 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 Q8N1Y9 231 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 OR10J6PQ8NGY7 276 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 AJUBAQ96IF1 538 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 DMXL1Q9Y485 3027 aa5.68□□□□□ -1.5
SYNPO2-203ENST00000434046 MYO18BQ8IUG5 2567 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms