RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PF4V1P10720 104 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 LINC00527Q9UJ94 153 aa10.3□□□□□ -0.76
COL6A3-207ENST00000433762 IGHV4-38-2P0DP08 117 aa10.29□□□□□ -0.76
COL6A3-207ENST00000433762 DSCR9P59020 149 aa10.29□□□□□ -0.76
COL6A3-207ENST00000433762 KIF25-AS1Q9Y6Z4 181 aa10.29□□□□□ -0.76
COL6A3-207ENST00000433762 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
COL6A3-207ENST00000433762 MED13LQ71F56 2210 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 IGHV3OR16-10A0A075B7F0 116 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 OR11H12B2RN74 326 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 TCTAP57738 103 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 OR11H1Q8NG94 326 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 VPS25Q9BRG1 176 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 E9PLD3 99 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 RNF151Q2KHN1 245 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
COL6A3-207ENST00000433762 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 KLK15Q9H2R5 256 aa10.28□□□□□ -0.76
COL6A3-207ENST00000433762 MYMXA0A1B0GTQ4 84 aa10.27□□□□□ -0.77
COL6A3-207ENST00000433762 LINC00315P59091 139 aa10.27□□□□□ -0.77
COL6A3-207ENST00000433762 BAALCQ8WXS3 180 aa10.27□□□□□ -0.77
COL6A3-207ENST00000433762 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 B4DSR2 109 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 LY6EQ16553 131 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 RELNP78509 3460 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
COL6A3-207ENST00000433762 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
COL6A3-207ENST00000433762 G3V4G9 280 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 IGHV3-11P01762 117 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
COL6A3-207ENST00000433762 RPL11P62913 178 aaKnown RBP10.25□□□□□ -0.77
COL6A3-207ENST00000433762 RNF152Q8N8N0 203 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 MGPP08493 103 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 PSMB8P28062 276 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 ATP5J2P56134 94 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
COL6A3-207ENST00000433762 GNRH2O43555 120 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 BLCAPP62952 87 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 CSTL1Q9H114 145 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
COL6A3-207ENST00000433762 IGHV4-30-2A0A087WSY4 118 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 IGLL5B9A064 214 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 LGALS9O00182 355 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 VCYO14598 125 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 COTL1Q14019 142 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 C9orf85Q96MD7 179 aa10.24□□□□□ -0.77
COL6A3-207ENST00000433762 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 J3KRW8 73 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 HIST1H4GQ99525 98 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 MUC4Q99102 2169 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 F6UB75 175 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
COL6A3-207ENST00000433762 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 F8W1H4 67 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 J3QLI3 93 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 SYT8Q8NBV8 401 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 A6NJY4 79 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 HERVK_113P61574 105 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
COL6A3-207ENST00000433762 COX6B1P14854 86 aa10.21□□□□□ -0.77
COL6A3-207ENST00000433762 SNRPD3P62318 126 aaKnown RBP10.21□□□□□ -0.77
COL6A3-207ENST00000433762 ZFP2Q6ZN57 461 aa10.21□□□□□ -0.77
COL6A3-207ENST00000433762 NAA38Q9BRA0 125 aaKnown RBP10.21□□□□□ -0.77
COL6A3-207ENST00000433762 A0A0J9YX75 114 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 LGALS1P09382 135 aaKnown RBP10.21□□□□□ -0.78
COL6A3-207ENST00000433762 PMVKQ15126 192 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 RHOHQ15669 191 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 RRN3P1Q2M238 152 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.78
COL6A3-207ENST00000433762 KMT2BQ9UMN6 2715 aaPredicted RBP10.2□□□□□ -0.78
COL6A3-207ENST00000433762 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
COL6A3-207ENST00000433762 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
COL6A3-207ENST00000433762 DEFB1P60022 68 aa10.2□□□□□ -0.78
COL6A3-207ENST00000433762 Q6ZS46 218 aa10.2□□□□□ -0.78
COL6A3-207ENST00000433762 K7EQG2 157 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 K7ERJ3 54 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 SAP30O75446 220 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 EDA2RQ9HAV5 297 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 AGRNO00468 2067 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 C11orf86A6NJI1 115 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 CRYGDP07320 174 aa10.19□□□□□ -0.78
COL6A3-207ENST00000433762 CD7P09564 240 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms