RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 C10orf126Q8N4M7 172 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 VCX2Q9H322 139 aa8.82□□□□□ -1
HMGCS1-202ENST00000433297 PRR9Q5T870 116 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
HMGCS1-202ENST00000433297 CCDC179H3BU77 68 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
HMGCS1-202ENST00000433297 DEFB124Q8NES8 71 aa8.81□□□□□ -1
HMGCS1-202ENST00000433297 RELNP78509 3460 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 ACACAQ13085 2346 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 COX6B1P14854 86 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 FAM57AQ8TBR7 257 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 F5H697 171 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
HMGCS1-202ENST00000433297 DPH3P1Q9H4G8 78 aa8.8□□□□□ -1
HMGCS1-202ENST00000433297 A4D1N5 150 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 NHLRC4P0CG21 123 aaPredicted RBP8.79□□□□□ -1
HMGCS1-202ENST00000433297 TSPEAR-AS2P59090 65 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 NPBQ8NG41 125 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GNRH2O43555 120 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 CRYGDP07320 174 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE12JA6NER3 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE7O76087 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 IGHV3-30P01768 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE12FP0CL80 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE12GP0CL81 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE12IP0CL82 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 LGALS3P17931 250 aaKnown RBP8.79□□□□□ -1
HMGCS1-202ENST00000433297 HERV-K104P63124 156 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 GAGE4Q13068 117 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 TIMD4Q96H15 378 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 SPTBN2O15020 2390 aa8.79□□□□□ -1
HMGCS1-202ENST00000433297 RBAKDNA6NC62 111 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
HMGCS1-202ENST00000433297 TCF15Q12870 199 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 C3orf56Q8N813 242 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 G3V318 75 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 IFITM1P13164 125 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 ASIPP42127 132 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 METTL26Q96S19 204 aa8.78□□□□□ -1
HMGCS1-202ENST00000433297 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 IGHV7-81A0A0B4J1V7 117 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 RHODO00212 210 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 Q8N1Y9 231 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 LINC01560Q8TB33 94 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 OPRPNQ99935 248 aaPredicted RBP8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 JPT2Q9H910 190 aa8.77□□□□□ -1.01
HMGCS1-202ENST00000433297 DCHS2Q6V1P9 2916 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 A0A087WWL8 130 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 J3QQQ9 107 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 TSHBP01222 138 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 PMVKQ15126 192 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 PLA2G2CQ5R387 149 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 CITED1Q99966 193 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 LINC00527Q9UJ94 153 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 ZNF256Q9Y2P7 627 aaPredicted RBP8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 TRBV7-9A0A0J9YWB2 115 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 F6UB75 175 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 PRSS2P07478 247 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
HMGCS1-202ENST00000433297 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 TRAV8-4A0A0B4J246 113 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 CLPSL1A2RUU4 121 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 CD3EP07766 207 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 ELANEP08246 267 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 FAM74A4Q5TZK3 123 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 B9A039 149 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 MUSTN1Q8IVN3 82 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 ADARB2-AS1A8MUL3 147 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 SBSPONQ8IVN8 264 aa8.75□□□□□ -1.01
HMGCS1-202ENST00000433297 TRAV21A0A0B4J279 112 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 ATP6V0E1O15342 81 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 SRD5A1P18405 259 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 C9orf47Q6ZRZ4 202 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 VMO1Q7Z5L0 202 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 C20orf173Q96LM9 149 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 OR10J6PQ8NGY7 276 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 NPC2P61916 151 aa8.74□□□□□ -1.01
HMGCS1-202ENST00000433297 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 CCDC140Q96MF4 163 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 AKAP6Q13023 2319 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 RPL32P62910 135 aaKnown RBP8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 GPHB5Q86YW7 130 aa8.73□□□□□ -1.01
HMGCS1-202ENST00000433297 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms