RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 NTN5Q8WTR8 489 aaPredicted RBP8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 NBR2O15453 112 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 DUSP14O95147 198 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3-30P01768 117 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 CTSGP08311 255 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 IGHV3-30-5P0DP03 117 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 NDPQ00604 133 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 BSPH1Q075Z2 132 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 HES1Q14469 280 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 FAM159AQ6UWV7 190 aa8.47□□□□□ -1.05
SEMA4D-209ENST00000429836 IFITM1P13164 125 aa8.46□□□□□ -1.05
SEMA4D-209ENST00000429836 PLA2G2CQ5R387 149 aa8.46□□□□□ -1.05
SEMA4D-209ENST00000429836 ASCL5Q7RTU5 278 aa8.46□□□□□ -1.05
SEMA4D-209ENST00000429836 C3orf56Q8N813 242 aa8.46□□□□□ -1.05
SEMA4D-209ENST00000429836 NUP37Q8NFH4 326 aa8.46□□□□□ -1.05
SEMA4D-209ENST00000429836 SPTAN1Q13813 2472 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 SCGB2A1O75556 95 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 CLEC3BP05452 202 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 CRYGDP07320 174 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 ELANEP08246 267 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 HIF1ANQ9NWT6 349 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 PRO1854Q9UHT4 67 aa8.46□□□□□ -1.06
SEMA4D-209ENST00000429836 TLN1Q9Y490 2541 aaKnown RBP8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 MGPP08493 103 aa8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 MUC6Q6W4X9 2439 aa8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 IGF1P05019 195 aa8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 Q8N1Y9 231 aa8.45□□□□□ -1.06
SEMA4D-209ENST00000429836 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 PRR9Q5T870 116 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 SLC50A1Q9BRV3 221 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 DYNLRB1Q9NP97 96 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 KAAG1Q9UBP8 84 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 LY6LH3BQJ8 138 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 DEFB109BQ30KR1 87 aa8.44□□□□□ -1.06
SEMA4D-209ENST00000429836 IGHV4-39P01824 125 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 ARL3P36405 182 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 BEX4Q9NWD9 120 aaPredicted RBP8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 A4D1N5 150 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 TSHBP01222 138 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 RNASE6Q93091 150 aaKnown RBP8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 ZNF292O60281 2723 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 ASIPP42127 132 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 DEFB124Q8NES8 71 aa8.43□□□□□ -1.06
SEMA4D-209ENST00000429836 TIMD4Q96H15 378 aa8.42□□□□□ -1.06
SEMA4D-209ENST00000429836 RNF5Q99942 180 aa8.42□□□□□ -1.06
SEMA4D-209ENST00000429836 IGHV4-4A0A075B6R2 117 aa8.42□□□□□ -1.06
SEMA4D-209ENST00000429836 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
SEMA4D-209ENST00000429836 BUB3O43684 328 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 HERVK_113P61574 105 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 Q1RN00 199 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 IGFL2Q6UWQ7 119 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 TP53TG1Q9Y2A0 90 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 PIP4P1Q86T03 277 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 ATRXP46100 2492 aa8.41□□□□□ -1.06
SEMA4D-209ENST00000429836 IGHV3-64A0A075B6Q5 118 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 DEFB1P60022 68 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 S100A4P26447 101 aaKnown RBP8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 NBL1P41271 181 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 AMELXQ99217 191 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 DPH3P1Q9H4G8 78 aa8.4□□□□□ -1.06
SEMA4D-209ENST00000429836 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 ZNF883P0CG24 379 aa8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 ID1P41134 155 aa8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 LINC01620Q4KN68 170 aa8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 TNFRSF18Q9Y5U5 241 aa8.4□□□□□ -1.07
SEMA4D-209ENST00000429836 J3QQQ9 107 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 NPBQ8NG41 125 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 FAM57AQ8TBR7 257 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 PHLDA3Q9Y5J5 127 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
SEMA4D-209ENST00000429836 CLPSL1A2RUU4 121 aa8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 C15orf32Q32M92 178 aa8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 PMVKQ15126 192 aa8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 GPHB5Q86YW7 130 aa8.38□□□□□ -1.07
SEMA4D-209ENST00000429836 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms