RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SMIM2Q9BVW6 85 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 CREBBPQ92793 2442 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
THBS3-202ENST00000428962 NXPH4O95158 308 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 NUDT3O95989 172 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 PRSS1P07477 247 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 RNF152Q8N8N0 203 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
THBS3-202ENST00000428962 ABCA12Q86UK0 2595 aa10.27□□□□□ -0.76
THBS3-202ENST00000428962 CD5LO43866 347 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.77
THBS3-202ENST00000428962 ORMDL2Q53FV1 153 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 BVES-AS1Q5T3Y7 98 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 FBN2P35556 2912 aa10.27□□□□□ -0.77
THBS3-202ENST00000428962 C7orf71A4D174 169 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 K7EQG2 157 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 SUMO2P61956 95 aaKnown RBP10.26□□□□□ -0.77
THBS3-202ENST00000428962 ODF1Q14990 250 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 APCP25054 2843 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 A0A087WW49 117 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 GNRH2O43555 120 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 MGPP08493 103 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 FGF6P10767 208 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
THBS3-202ENST00000428962 KIR3DS1Q14943 382 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
THBS3-202ENST00000428962 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 DKK2Q9UBU2 259 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
THBS3-202ENST00000428962 A0A0J9YX75 114 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
THBS3-202ENST00000428962 IGKCP01834 107 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 C2orf91Q6ZV80 131 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 TEX29Q8N6K0 151 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 Q96MF0 132 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 FOXC2Q99958 501 aa10.25□□□□□ -0.77
THBS3-202ENST00000428962 CR1P17927 2039 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 SIVA1O15304 175 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 DPM2O94777 84 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 Q8N2B8 174 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 RASL10AQ92737 203 aa10.24□□□□□ -0.77
THBS3-202ENST00000428962 ANKRD17O75179 2603 aaKnown RBP10.24□□□□□ -0.77
THBS3-202ENST00000428962 CDKN1BP46527 198 aa10.23□□□□□ -0.77
THBS3-202ENST00000428962 K7EP13 123 aa10.23□□□□□ -0.77
THBS3-202ENST00000428962 CD7P09564 240 aa10.23□□□□□ -0.77
THBS3-202ENST00000428962 PRRC2AP48634 2157 aaKnown RBP10.23□□□□□ -0.77
THBS3-202ENST00000428962 SVEP1Q4LDE5 3571 aa10.23□□□□□ -0.77
THBS3-202ENST00000428962 MYO9AB2RTY4 2548 aa10.22□□□□□ -0.77
THBS3-202ENST00000428962 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
THBS3-202ENST00000428962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.22□□□□□ -0.77
THBS3-202ENST00000428962 NMUP48645 174 aa10.22□□□□□ -0.77
THBS3-202ENST00000428962 SEC11AP67812 179 aa10.22□□□□□ -0.77
THBS3-202ENST00000428962 FOXI2Q6ZQN5 318 aa10.22□□□□□ -0.77
THBS3-202ENST00000428962 RBX1P62877 108 aa10.21□□□□□ -0.77
THBS3-202ENST00000428962 RPL32P62910 135 aaKnown RBP10.21□□□□□ -0.77
THBS3-202ENST00000428962 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.77
THBS3-202ENST00000428962 CSPG4Q6UVK1 2322 aa10.21□□□□□ -0.77
THBS3-202ENST00000428962 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
THBS3-202ENST00000428962 A0A087WX48 190 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 SPRY2O43597 315 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 HLA-DRB4P13762 266 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 PLNP26678 52 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 HSD52Q0P140 79 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 TMEM86BQ8N661 226 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 TOMM6Q96B49 74 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.78
THBS3-202ENST00000428962 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.78
THBS3-202ENST00000428962 PDZD2O15018 2839 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 PEMTQ9UBM1 199 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 HHLA3Q9XRX5 114 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 CSMD2Q7Z408 3487 aa10.2□□□□□ -0.78
THBS3-202ENST00000428962 TRAV2A0A0B4J234 112 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 IGHV3-16A0A0C4DH30 117 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 LINC01619G3V211 115 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 DUX5Q96PT3 197 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 CELSR1Q9NYQ6 3014 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 POLQO75417 2590 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 A6NDN8 102 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 TAX1BP3O14907 124 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 KRTAP1-3Q8IUG1 177 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
THBS3-202ENST00000428962 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms