RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 FHITP49789 147 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 NFE4Q86UQ8 179 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 MAPKAPK5-AS1Q8N8E1 139 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 HIST1H2BAQ96A08 127 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.41
PSPC1-202ENST00000427943 TRBV6-4A0A1B0GX49 114 aa12.45□□□□□ -0.42
PSPC1-202ENST00000427943 CRYGDP07320 174 aa12.45□□□□□ -0.42
PSPC1-202ENST00000427943 ASIPP42127 132 aa12.45□□□□□ -0.42
PSPC1-202ENST00000427943 PTH2Q96A98 100 aa12.45□□□□□ -0.42
PSPC1-202ENST00000427943 NKX6-2Q9C056 277 aaPredicted RBP12.45□□□□□ -0.42
PSPC1-202ENST00000427943 B4DEV8 164 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 M0R036 132 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 CIDEAO60543 219 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 TIRAPP58753 221 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 UBE2G1P62253 170 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 KCNRGQ8N5I3 272 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 PARLQ9H300 379 aa12.44□□□□□ -0.42
PSPC1-202ENST00000427943 IGHV3-38A0A0C4DH36 116 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 H3BVH4 76 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 EREGO14944 169 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 SH2D1AO60880 128 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
PSPC1-202ENST00000427943 CRIP1P50238 77 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 ZNF345Q14585 488 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 LGALSLQ3ZCW2 172 aaPredicted RBP12.43□□□□□ -0.42
PSPC1-202ENST00000427943 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 FMC1Q96HJ9 113 aa12.43□□□□□ -0.42
PSPC1-202ENST00000427943 ABCA13Q86UQ4 5058 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 A0A1B0GV50 99 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 K7EP13 123 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 Q6ZSN1 163 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 C10orf126Q8N4M7 172 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 FAM213BQ8TBF2 198 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 JPT2Q9H910 190 aa12.42□□□□□ -0.42
PSPC1-202ENST00000427943 A0A087WTM6 91 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 GRIFINA4D1Z8 144 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 A8MWV9 139 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 AKR1C3P42330 323 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 ZFP30Q9Y2G7 519 aa12.41□□□□□ -0.42
PSPC1-202ENST00000427943 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 PAGE4O60829 102 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 FAM162BQ5T6X4 162 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
PSPC1-202ENST00000427943 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
PSPC1-202ENST00000427943 DNAH5Q8TE73 4624 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 BCL2L11O43521 198 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 IGHV3-33P01772 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 ARMS2P0C7Q2 107 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 IGHV3-30-3P0DP02 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 GAGE1Q13065 139 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 GAGE4Q13068 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 GAGE5Q13069 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 LELP1Q5T871 98 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 COX8CQ7Z4L0 72 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
PSPC1-202ENST00000427943 APOBP04114 4563 aaKnown RBP12.38□□□□□ -0.43
PSPC1-202ENST00000427943 TRBV6-1A0A0K0K1D8 114 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 HMSDA8MTL9 139 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 LTAP01374 205 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 ZFP2Q6ZN57 461 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 Q9HAA7 133 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
PSPC1-202ENST00000427943 A0A0D9SG52 128 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 ZNF674Q2M3X9 581 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 DNLZQ5SXM8 178 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 CDPF1Q6NVV7 123 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
PSPC1-202ENST00000427943 SYT8Q8NBV8 401 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 MBD3L1Q8WWY6 194 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 Q9UF83 564 aa12.37□□□□□ -0.43
PSPC1-202ENST00000427943 SCO2A0A1W2PP80 73 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 UMAD1C9J7I0 102 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 PSCAO43653 123 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 LINC00694P0DN24 101 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 LINC01559Q495D7 138 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 FAM74A4Q5TZK3 123 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 Q8N1X5 172 aa12.36□□□□□ -0.43
PSPC1-202ENST00000427943 IBA57-AS1B1ANH7 110 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms